Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX39AO00148 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.92■□□□□ 0.62
DDX39AO00148 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.92■□□□□ 0.62
DDX39AO00148 TIMM8BP1-201ENST00000452384 211 ntBASIC18.92■□□□□ 0.62
DDX39AO00148 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.92■□□□□ 0.62
DDX39AO00148 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.92■□□□□ 0.62
DDX39AO00148 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.92■□□□□ 0.62
DDX39AO00148 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.92■□□□□ 0.62
DDX39AO00148 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.92■□□□□ 0.62
DDX39AO00148 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
DDX39AO00148 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.92■□□□□ 0.62
DDX39AO00148 CYP2A7P1-201ENST00000595391 815 ntBASIC18.92■□□□□ 0.62
DDX39AO00148 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
DDX39AO00148 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.92■□□□□ 0.62
DDX39AO00148 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
DDX39AO00148 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX39AO00148 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX39AO00148 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX39AO00148 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.92■□□□□ 0.62
DDX39AO00148 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX39AO00148 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX39AO00148 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
DDX39AO00148 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
DDX39AO00148 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
DDX39AO00148 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX39AO00148 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DDX39AO00148 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX39AO00148 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
DDX39AO00148 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DDX39AO00148 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.91■□□□□ 0.62
DDX39AO00148 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DDX39AO00148 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DDX39AO00148 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX39AO00148 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DDX39AO00148 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DDX39AO00148 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX39AO00148 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
DDX39AO00148 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
DDX39AO00148 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX39AO00148 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DDX39AO00148 CNN2P11-201ENST00000429351 262 ntBASIC18.91■□□□□ 0.62
DDX39AO00148 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.91■□□□□ 0.62
DDX39AO00148 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.91■□□□□ 0.62
DDX39AO00148 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.91■□□□□ 0.62
DDX39AO00148 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.91■□□□□ 0.62
DDX39AO00148 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DDX39AO00148 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX39AO00148 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX39AO00148 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DDX39AO00148 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
DDX39AO00148 TUBB8P12-201ENST00000308911 1335 ntBASIC18.91■□□□□ 0.62
DDX39AO00148 TUBB7P-202ENST00000428444 1305 ntBASIC18.91■□□□□ 0.62
DDX39AO00148 TUBB8P7-204ENST00000567960 1332 ntBASIC18.91■□□□□ 0.62
DDX39AO00148 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX39AO00148 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
DDX39AO00148 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.91■□□□□ 0.62
DDX39AO00148 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX39AO00148 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.91■□□□□ 0.62
DDX39AO00148 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.9■□□□□ 0.62
DDX39AO00148 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX39AO00148 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
DDX39AO00148 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX39AO00148 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX39AO00148 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DDX39AO00148 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX39AO00148 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX39AO00148 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX39AO00148 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DDX39AO00148 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DDX39AO00148 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX39AO00148 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DDX39AO00148 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX39AO00148 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DDX39AO00148 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX39AO00148 AL355306.1-201ENST00000415580 579 ntBASIC18.9■□□□□ 0.62
DDX39AO00148 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
DDX39AO00148 AC254562.1-201ENST00000417586 456 ntBASIC18.9■□□□□ 0.62
DDX39AO00148 AL671277.1-201ENST00000429656 993 ntBASIC18.9■□□□□ 0.62
DDX39AO00148 ACTG1P14-201ENST00000446382 1122 ntBASIC18.9■□□□□ 0.62
DDX39AO00148 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
DDX39AO00148 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.9■□□□□ 0.62
DDX39AO00148 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.9■□□□□ 0.62
DDX39AO00148 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.9■□□□□ 0.62
DDX39AO00148 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.9■□□□□ 0.62
DDX39AO00148 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
DDX39AO00148 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
DDX39AO00148 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.9■□□□□ 0.62
DDX39AO00148 AL009183.1-201ENST00000603760 355 ntBASIC18.9■□□□□ 0.62
DDX39AO00148 AL031055.1-201ENST00000606362 631 ntBASIC18.9■□□□□ 0.62
DDX39AO00148 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DDX39AO00148 AP001350.2-201ENST00000625104 1094 ntBASIC18.9■□□□□ 0.62
DDX39AO00148 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.9■□□□□ 0.62
DDX39AO00148 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.9■□□□□ 0.62
DDX39AO00148 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DDX39AO00148 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
DDX39AO00148 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX39AO00148 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX39AO00148 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX39AO00148 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX39AO00148 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms