Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
SBNO1A3KN83 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC22.53■■□□□ 1.2
SBNO1A3KN83 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC22.53■■□□□ 1.2
SBNO1A3KN83 AC044860.1-202ENST00000559481 777 ntBASIC22.53■■□□□ 1.2
SBNO1A3KN83 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC22.53■■□□□ 1.2
SBNO1A3KN83 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC22.53■■□□□ 1.2
SBNO1A3KN83 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC22.53■■□□□ 1.2
SBNO1A3KN83 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC22.53■■□□□ 1.2
SBNO1A3KN83 AC099568.2-201ENST00000609194 695 ntBASIC22.53■■□□□ 1.2
SBNO1A3KN83 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SBNO1A3KN83 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
SBNO1A3KN83 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC22.53■■□□□ 1.2
SBNO1A3KN83 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
SBNO1A3KN83 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC22.53■■□□□ 1.2
SBNO1A3KN83 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SBNO1A3KN83 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SBNO1A3KN83 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SBNO1A3KN83 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC22.53■■□□□ 1.2
SBNO1A3KN83 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SBNO1A3KN83 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
SBNO1A3KN83 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SBNO1A3KN83 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
SBNO1A3KN83 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
SBNO1A3KN83 WDR53-204ENST00000433160 887 ntTSL 5 BASIC22.52■■□□□ 1.2
SBNO1A3KN83 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
SBNO1A3KN83 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC22.52■■□□□ 1.2
SBNO1A3KN83 RAB35-202ENST00000534951 939 ntTSL 2 BASIC22.52■■□□□ 1.2
SBNO1A3KN83 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
SBNO1A3KN83 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
SBNO1A3KN83 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
SBNO1A3KN83 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
SBNO1A3KN83 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SBNO1A3KN83 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC22.52■■□□□ 1.2
SBNO1A3KN83 TEX48-202ENST00000612244 662 ntTSL 3 BASIC22.52■■□□□ 1.2
SBNO1A3KN83 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC22.52■■□□□ 1.2
SBNO1A3KN83 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SBNO1A3KN83 AC108860.2-201ENST00000562760 2183 ntBASIC22.52■■□□□ 1.2
SBNO1A3KN83 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
SBNO1A3KN83 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SBNO1A3KN83 AIRN-201ENST00000601203 4374 ntBASIC22.52■■□□□ 1.2
SBNO1A3KN83 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
SBNO1A3KN83 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC22.52■■□□□ 1.2
SBNO1A3KN83 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SBNO1A3KN83 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
SBNO1A3KN83 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC22.52■■□□□ 1.19
SBNO1A3KN83 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.19
SBNO1A3KN83 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SBNO1A3KN83 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
SBNO1A3KN83 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
SBNO1A3KN83 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SBNO1A3KN83 OSM-203ENST00000403463 464 ntTSL 3 BASIC22.51■■□□□ 1.19
SBNO1A3KN83 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC22.51■■□□□ 1.19
SBNO1A3KN83 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC22.51■■□□□ 1.19
SBNO1A3KN83 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC22.51■■□□□ 1.19
SBNO1A3KN83 FHL2-212ENST00000607522 759 ntTSL 2 BASIC22.51■■□□□ 1.19
SBNO1A3KN83 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
SBNO1A3KN83 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC22.51■■□□□ 1.19
SBNO1A3KN83 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SBNO1A3KN83 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SBNO1A3KN83 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
SBNO1A3KN83 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SBNO1A3KN83 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SBNO1A3KN83 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC22.51■■□□□ 1.19
SBNO1A3KN83 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SBNO1A3KN83 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SBNO1A3KN83 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SBNO1A3KN83 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
SBNO1A3KN83 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC22.5■■□□□ 1.19
SBNO1A3KN83 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SBNO1A3KN83 FUZ-207ENST00000526575 482 ntTSL 4 BASIC22.5■■□□□ 1.19
SBNO1A3KN83 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SBNO1A3KN83 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SBNO1A3KN83 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
SBNO1A3KN83 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC22.5■■□□□ 1.19
SBNO1A3KN83 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SBNO1A3KN83 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SBNO1A3KN83 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SBNO1A3KN83 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC22.5■■□□□ 1.19
SBNO1A3KN83 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SBNO1A3KN83 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SBNO1A3KN83 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC22.5■■□□□ 1.19
SBNO1A3KN83 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC22.5■■□□□ 1.19
SBNO1A3KN83 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SBNO1A3KN83 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SBNO1A3KN83 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SBNO1A3KN83 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SBNO1A3KN83 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SBNO1A3KN83 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SBNO1A3KN83 TTTY23B-201ENST00000442790 549 ntBASIC22.5■■□□□ 1.19
SBNO1A3KN83 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SBNO1A3KN83 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SBNO1A3KN83 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC22.5■■□□□ 1.19
SBNO1A3KN83 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC22.5■■□□□ 1.19
SBNO1A3KN83 AC124947.2-201ENST00000547118 1133 ntBASIC22.5■■□□□ 1.19
SBNO1A3KN83 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC22.5■■□□□ 1.19
SBNO1A3KN83 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SBNO1A3KN83 AL033527.4-201ENST00000641026 673 ntBASIC22.5■■□□□ 1.19
SBNO1A3KN83 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SBNO1A3KN83 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SBNO1A3KN83 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms