Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 IFNL4P1-201ENST00000607083 540 ntBASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 REXO1L6P-202ENST00000619970 1078 ntBASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC12.27□□□□□ -0.44
TRGV1A0A0A0MS02 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRGV1A0A0A0MS02 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TRGV1A0A0A0MS02 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC12.27□□□□□ -0.44
TRGV1A0A0A0MS02 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
TRGV1A0A0A0MS02 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TRGV1A0A0A0MS02 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRGV1A0A0A0MS02 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TRGV1A0A0A0MS02 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.44
TRGV1A0A0A0MS02 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRGV1A0A0A0MS02 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC12.27□□□□□ -0.44
TRGV1A0A0A0MS02 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 AC139887.3-201ENST00000568585 713 ntBASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 AC064862.7-201ENST00000604520 867 ntBASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 TUBB8P12-201ENST00000308911 1335 ntBASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 TUBB7P-202ENST00000428444 1305 ntBASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 TUBB8P7-204ENST00000567960 1332 ntBASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 AL021920.2-201ENST00000624828 1351 ntBASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRGV1A0A0A0MS02 CA12-203ENST00000422263 2556 ntTSL 2 BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms