Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
DDX49Q9Y6V7 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
DDX49Q9Y6V7 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
DDX49Q9Y6V7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
DDX49Q9Y6V7 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
DDX49Q9Y6V7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
DDX49Q9Y6V7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
DDX49Q9Y6V7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.84
DDX49Q9Y6V7 KRT8P47-201ENST00000604727 1398 ntBASIC20.33■□□□□ 0.84
DDX49Q9Y6V7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
DDX49Q9Y6V7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.33■□□□□ 0.84
DDX49Q9Y6V7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 AC007967.3-201ENST00000434308 558 ntBASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 AC025062.2-201ENST00000605477 670 ntBASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 AC010460.3-201ENST00000511359 1579 ntBASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX49Q9Y6V7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 AC132872.4-202ENST00000622924 2756 ntBASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 AC106730.1-201ENST00000566722 1090 ntBASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX49Q9Y6V7 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
DDX49Q9Y6V7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
DDX49Q9Y6V7 LINC00554-201ENST00000564841 3011 ntBASIC20.3■□□□□ 0.84
DDX49Q9Y6V7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX49Q9Y6V7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX49Q9Y6V7 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC20.3■□□□□ 0.84
DDX49Q9Y6V7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX49Q9Y6V7 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
DDX49Q9Y6V7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.3■□□□□ 0.84
DDX49Q9Y6V7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX49Q9Y6V7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.3■□□□□ 0.84
DDX49Q9Y6V7 PMS2P1-201ENST00000431037 1228 ntBASIC20.3■□□□□ 0.84
DDX49Q9Y6V7 SCARNA2-201ENST00000458748 420 ntBASIC20.3■□□□□ 0.84
DDX49Q9Y6V7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX49Q9Y6V7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DDX49Q9Y6V7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
DDX49Q9Y6V7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.3■□□□□ 0.84
DDX49Q9Y6V7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.3■□□□□ 0.84
DDX49Q9Y6V7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.3■□□□□ 0.84
DDX49Q9Y6V7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.3■□□□□ 0.84
DDX49Q9Y6V7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms