Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IFT52Q9Y366 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
IFT52Q9Y366 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IFT52Q9Y366 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
IFT52Q9Y366 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFT52Q9Y366 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFT52Q9Y366 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFT52Q9Y366 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFT52Q9Y366 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.86■□□□□ 0.13
IFT52Q9Y366 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.86■□□□□ 0.13
IFT52Q9Y366 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.86■□□□□ 0.13
IFT52Q9Y366 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
IFT52Q9Y366 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFT52Q9Y366 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.86■□□□□ 0.13
IFT52Q9Y366 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
IFT52Q9Y366 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.86■□□□□ 0.13
IFT52Q9Y366 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IFT52Q9Y366 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFT52Q9Y366 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IFT52Q9Y366 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
IFT52Q9Y366 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFT52Q9Y366 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
IFT52Q9Y366 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
IFT52Q9Y366 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.86■□□□□ 0.13
IFT52Q9Y366 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IFT52Q9Y366 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.86■□□□□ 0.13
IFT52Q9Y366 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.86■□□□□ 0.13
IFT52Q9Y366 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.86■□□□□ 0.13
IFT52Q9Y366 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IFT52Q9Y366 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.86■□□□□ 0.13
IFT52Q9Y366 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.86■□□□□ 0.13
IFT52Q9Y366 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFT52Q9Y366 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFT52Q9Y366 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
IFT52Q9Y366 TUBB8P12-201ENST00000308911 1335 ntBASIC15.86■□□□□ 0.13
IFT52Q9Y366 TUBB7P-202ENST00000428444 1305 ntBASIC15.86■□□□□ 0.13
IFT52Q9Y366 TUBB8P7-204ENST00000567960 1332 ntBASIC15.86■□□□□ 0.13
IFT52Q9Y366 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IFT52Q9Y366 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFT52Q9Y366 AC099063.4-201ENST00000641099 1602 ntBASIC15.86■□□□□ 0.13
IFT52Q9Y366 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IFT52Q9Y366 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.86■□□□□ 0.13
IFT52Q9Y366 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.86■□□□□ 0.13
IFT52Q9Y366 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.86■□□□□ 0.13
IFT52Q9Y366 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
IFT52Q9Y366 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.86■□□□□ 0.13
IFT52Q9Y366 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IFT52Q9Y366 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.85■□□□□ 0.13
IFT52Q9Y366 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.85■□□□□ 0.13
IFT52Q9Y366 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
IFT52Q9Y366 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
IFT52Q9Y366 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IFT52Q9Y366 AC006449.5-201ENST00000610658 2098 ntBASIC15.85■□□□□ 0.13
IFT52Q9Y366 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IFT52Q9Y366 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.85■□□□□ 0.13
IFT52Q9Y366 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IFT52Q9Y366 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IFT52Q9Y366 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
IFT52Q9Y366 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IFT52Q9Y366 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.85■□□□□ 0.13
IFT52Q9Y366 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IFT52Q9Y366 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
IFT52Q9Y366 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.85■□□□□ 0.13
IFT52Q9Y366 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.85■□□□□ 0.13
IFT52Q9Y366 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.85■□□□□ 0.13
IFT52Q9Y366 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
IFT52Q9Y366 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.85■□□□□ 0.13
IFT52Q9Y366 KRT16P4-201ENST00000453883 522 ntBASIC15.85■□□□□ 0.13
IFT52Q9Y366 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.85■□□□□ 0.13
IFT52Q9Y366 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.85■□□□□ 0.13
IFT52Q9Y366 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.85■□□□□ 0.13
IFT52Q9Y366 AL591684.3-201ENST00000605187 298 ntBASIC15.85■□□□□ 0.13
IFT52Q9Y366 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IFT52Q9Y366 AC073592.4-201ENST00000623827 446 ntBASIC15.85■□□□□ 0.13
IFT52Q9Y366 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
IFT52Q9Y366 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
IFT52Q9Y366 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IFT52Q9Y366 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
IFT52Q9Y366 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
IFT52Q9Y366 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.85■□□□□ 0.13
IFT52Q9Y366 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
IFT52Q9Y366 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IFT52Q9Y366 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IFT52Q9Y366 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
IFT52Q9Y366 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IFT52Q9Y366 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
IFT52Q9Y366 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFT52Q9Y366 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.84■□□□□ 0.13
IFT52Q9Y366 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFT52Q9Y366 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
IFT52Q9Y366 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFT52Q9Y366 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFT52Q9Y366 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
IFT52Q9Y366 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFT52Q9Y366 AC097637.2-201ENST00000624096 1997 ntBASIC15.84■□□□□ 0.13
IFT52Q9Y366 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFT52Q9Y366 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFT52Q9Y366 AC148477.5-201ENST00000625164 1645 ntBASIC15.84■□□□□ 0.13
IFT52Q9Y366 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IFT52Q9Y366 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms