Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 AC073347.1-201ENST00000421633 2643 ntBASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 AP000523.1-201ENST00000398242 1049 ntBASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 RBM17P1-201ENST00000453646 1190 ntBASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 FITM1-202ENST00000559294 800 ntBASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 AC004263.2-201ENST00000617183 678 ntBASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 AC142381.4-202ENST00000563973 229 ntBASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 AC233702.5-201ENST00000584107 538 ntBASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.44■□□□□ 0.06
ERGIC3Q9Y282 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ERGIC3Q9Y282 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ERGIC3Q9Y282 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
ERGIC3Q9Y282 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.43■□□□□ 0.06
ERGIC3Q9Y282 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ERGIC3Q9Y282 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
ERGIC3Q9Y282 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
ERGIC3Q9Y282 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ERGIC3Q9Y282 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ERGIC3Q9Y282 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ERGIC3Q9Y282 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.43■□□□□ 0.06
ERGIC3Q9Y282 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ERGIC3Q9Y282 TSPY14P-201ENST00000303979 915 ntBASIC15.43■□□□□ 0.06
ERGIC3Q9Y282 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.43■□□□□ 0.06
ERGIC3Q9Y282 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
ERGIC3Q9Y282 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.43■□□□□ 0.06
ERGIC3Q9Y282 COX5BP2-201ENST00000392354 334 ntBASIC15.43■□□□□ 0.06
ERGIC3Q9Y282 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ERGIC3Q9Y282 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.43■□□□□ 0.06
ERGIC3Q9Y282 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.43■□□□□ 0.06
ERGIC3Q9Y282 AC128688.1-201ENST00000487626 519 ntBASIC15.43■□□□□ 0.06
ERGIC3Q9Y282 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.43■□□□□ 0.06
ERGIC3Q9Y282 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.43■□□□□ 0.06
ERGIC3Q9Y282 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.43■□□□□ 0.06
ERGIC3Q9Y282 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.43■□□□□ 0.06
ERGIC3Q9Y282 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.43■□□□□ 0.06
ERGIC3Q9Y282 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
ERGIC3Q9Y282 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms