Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RTN4Q9NQC3 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RTN4Q9NQC3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC20.02■□□□□ 0.79
RTN4Q9NQC3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
RTN4Q9NQC3 HOXB1-202ENST00000577092 1414 ntBASIC20.02■□□□□ 0.79
RTN4Q9NQC3 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 AL035696.2-201ENST00000407941 709 ntBASIC20.01■□□□□ 0.79
RTN4Q9NQC3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 USP9YP2-201ENST00000504503 1000 ntBASIC20.01■□□□□ 0.79
RTN4Q9NQC3 USP9YP1-201ENST00000513521 1002 ntBASIC20.01■□□□□ 0.79
RTN4Q9NQC3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 ST20-AS1-201ENST00000560255 4223 ntBASIC20.01■□□□□ 0.79
RTN4Q9NQC3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4Q9NQC3 PTGES3L-201ENST00000409446 1781 ntTSL 2 BASIC20■□□□□ 0.79
RTN4Q9NQC3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RTN4Q9NQC3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTN4Q9NQC3 AC133963.1-201ENST00000504166 1679 ntBASIC20■□□□□ 0.79
RTN4Q9NQC3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RTN4Q9NQC3 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RTN4Q9NQC3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTN4Q9NQC3 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTN4Q9NQC3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
RTN4Q9NQC3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTN4Q9NQC3 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC20■□□□□ 0.79
RTN4Q9NQC3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RTN4Q9NQC3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RTN4Q9NQC3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RTN4Q9NQC3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RTN4Q9NQC3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC20■□□□□ 0.79
RTN4Q9NQC3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTN4Q9NQC3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20■□□□□ 0.79
RTN4Q9NQC3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20■□□□□ 0.79
RTN4Q9NQC3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTN4Q9NQC3 MTND2P7-201ENST00000521337 640 ntBASIC20■□□□□ 0.79
RTN4Q9NQC3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20■□□□□ 0.79
RTN4Q9NQC3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RTN4Q9NQC3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20■□□□□ 0.79
RTN4Q9NQC3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20■□□□□ 0.79
RTN4Q9NQC3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTN4Q9NQC3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTN4Q9NQC3 AC078925.2-201ENST00000624013 1973 ntBASIC20■□□□□ 0.79
RTN4Q9NQC3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTN4Q9NQC3 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTN4Q9NQC3 KRT18P55-202ENST00000578578 1546 ntBASIC20■□□□□ 0.79
RTN4Q9NQC3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RTN4Q9NQC3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RTN4Q9NQC3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RTN4Q9NQC3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTN4Q9NQC3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
RTN4Q9NQC3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20■□□□□ 0.79
RTN4Q9NQC3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20■□□□□ 0.79
RTN4Q9NQC3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
RTN4Q9NQC3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 BTN3A2-202ENST00000377708 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms