Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 AC023824.1-201ENST00000562945 2975 ntBASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
SND1-IT1Q9HBX3 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 AL391807.1-203ENST00000604392 2365 ntBASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 DBET-201ENST00000630918 3363 ntBASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 SLC9A7P1-201ENST00000554295 3311 ntBASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 MYCLP1-201ENST00000372451 1075 ntBASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 AC010947.1-201ENST00000623454 693 ntBASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 AC092850.2-201ENST00000623821 2697 ntBASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
SND1-IT1Q9HBX3 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 AC096633.1-201ENST00000422446 749 ntBASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 MTCL1P1-201ENST00000446207 792 ntBASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 RASA4DP-201ENST00000460726 1199 ntBASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 IGHV3-52-201ENST00000519770 353 ntBASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 AP002490.2-201ENST00000524791 560 ntBASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SND1-IT1Q9HBX3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC11.34□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms