Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
UPF2Q9HAU5 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.77■□□□□ 0.91
UPF2Q9HAU5 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC20.77■□□□□ 0.91
UPF2Q9HAU5 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.91
UPF2Q9HAU5 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.76■□□□□ 0.91
UPF2Q9HAU5 AC006538.1-201ENST00000567905 1585 ntBASIC20.76■□□□□ 0.91
UPF2Q9HAU5 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UPF2Q9HAU5 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UPF2Q9HAU5 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UPF2Q9HAU5 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UPF2Q9HAU5 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UPF2Q9HAU5 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UPF2Q9HAU5 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
UPF2Q9HAU5 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
UPF2Q9HAU5 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.76■□□□□ 0.91
UPF2Q9HAU5 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UPF2Q9HAU5 AC112907.2-201ENST00000448639 330 ntBASIC20.76■□□□□ 0.91
UPF2Q9HAU5 HLA-J-202ENST00000469281 1241 ntBASIC20.76■□□□□ 0.91
UPF2Q9HAU5 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.76■□□□□ 0.91
UPF2Q9HAU5 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.76■□□□□ 0.91
UPF2Q9HAU5 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.76■□□□□ 0.91
UPF2Q9HAU5 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.76■□□□□ 0.91
UPF2Q9HAU5 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UPF2Q9HAU5 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
UPF2Q9HAU5 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
UPF2Q9HAU5 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC20.76■□□□□ 0.91
UPF2Q9HAU5 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UPF2Q9HAU5 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UPF2Q9HAU5 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
UPF2Q9HAU5 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC20.76■□□□□ 0.91
UPF2Q9HAU5 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UPF2Q9HAU5 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UPF2Q9HAU5 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UPF2Q9HAU5 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.76■□□□□ 0.91
UPF2Q9HAU5 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UPF2Q9HAU5 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC20.76■□□□□ 0.91
UPF2Q9HAU5 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
UPF2Q9HAU5 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
UPF2Q9HAU5 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UPF2Q9HAU5 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.75■□□□□ 0.91
UPF2Q9HAU5 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.75■□□□□ 0.91
UPF2Q9HAU5 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.75■□□□□ 0.91
UPF2Q9HAU5 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
UPF2Q9HAU5 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.75■□□□□ 0.91
UPF2Q9HAU5 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.75■□□□□ 0.91
UPF2Q9HAU5 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UPF2Q9HAU5 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.75■□□□□ 0.91
UPF2Q9HAU5 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.75■□□□□ 0.91
UPF2Q9HAU5 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.75■□□□□ 0.91
UPF2Q9HAU5 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.75■□□□□ 0.91
UPF2Q9HAU5 AC011840.4-201ENST00000578471 627 ntBASIC20.75■□□□□ 0.91
UPF2Q9HAU5 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
UPF2Q9HAU5 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.75■□□□□ 0.91
UPF2Q9HAU5 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UPF2Q9HAU5 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UPF2Q9HAU5 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
UPF2Q9HAU5 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UPF2Q9HAU5 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
UPF2Q9HAU5 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UPF2Q9HAU5 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UPF2Q9HAU5 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UPF2Q9HAU5 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.75■□□□□ 0.91
UPF2Q9HAU5 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC20.75■□□□□ 0.91
UPF2Q9HAU5 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
UPF2Q9HAU5 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
UPF2Q9HAU5 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UPF2Q9HAU5 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UPF2Q9HAU5 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UPF2Q9HAU5 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
UPF2Q9HAU5 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
UPF2Q9HAU5 AL596257.1-201ENST00000641463 2694 ntBASIC20.74■□□□□ 0.91
UPF2Q9HAU5 AL021920.2-201ENST00000624828 1351 ntBASIC20.74■□□□□ 0.91
UPF2Q9HAU5 ME2P1-201ENST00000426028 1970 ntBASIC20.74■□□□□ 0.91
UPF2Q9HAU5 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
UPF2Q9HAU5 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UPF2Q9HAU5 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UPF2Q9HAU5 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.74■□□□□ 0.91
UPF2Q9HAU5 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UPF2Q9HAU5 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UPF2Q9HAU5 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.74■□□□□ 0.91
UPF2Q9HAU5 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.74■□□□□ 0.91
UPF2Q9HAU5 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UPF2Q9HAU5 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.74■□□□□ 0.91
UPF2Q9HAU5 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.74■□□□□ 0.91
UPF2Q9HAU5 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.74■□□□□ 0.91
UPF2Q9HAU5 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
UPF2Q9HAU5 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
UPF2Q9HAU5 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.74■□□□□ 0.91
UPF2Q9HAU5 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.74■□□□□ 0.91
UPF2Q9HAU5 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UPF2Q9HAU5 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
UPF2Q9HAU5 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UPF2Q9HAU5 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
UPF2Q9HAU5 AL365203.3-201ENST00000609742 2057 ntBASIC20.74■□□□□ 0.91
UPF2Q9HAU5 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.74■□□□□ 0.91
UPF2Q9HAU5 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UPF2Q9HAU5 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UPF2Q9HAU5 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
UPF2Q9HAU5 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
UPF2Q9HAU5 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms