Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.15■□□□□ 0.82
UPF3BQ9BZI7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.15■□□□□ 0.82
UPF3BQ9BZI7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.15■□□□□ 0.82
UPF3BQ9BZI7 MTDHP4-201ENST00000600287 670 ntBASIC20.15■□□□□ 0.82
UPF3BQ9BZI7 REXO1L6P-202ENST00000619970 1078 ntBASIC20.15■□□□□ 0.82
UPF3BQ9BZI7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UPF3BQ9BZI7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UPF3BQ9BZI7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UPF3BQ9BZI7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.15■□□□□ 0.82
UPF3BQ9BZI7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UPF3BQ9BZI7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
UPF3BQ9BZI7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UPF3BQ9BZI7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
UPF3BQ9BZI7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UPF3BQ9BZI7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC20.15■□□□□ 0.82
UPF3BQ9BZI7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
UPF3BQ9BZI7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
UPF3BQ9BZI7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
UPF3BQ9BZI7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
UPF3BQ9BZI7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
UPF3BQ9BZI7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC20.14■□□□□ 0.82
UPF3BQ9BZI7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
UPF3BQ9BZI7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC20.14■□□□□ 0.82
UPF3BQ9BZI7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
UPF3BQ9BZI7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC20.14■□□□□ 0.81
UPF3BQ9BZI7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
UPF3BQ9BZI7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UPF3BQ9BZI7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.14■□□□□ 0.81
UPF3BQ9BZI7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UPF3BQ9BZI7 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
UPF3BQ9BZI7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
UPF3BQ9BZI7 KRT8P49-201ENST00000604166 1432 ntBASIC20.14■□□□□ 0.81
UPF3BQ9BZI7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.14■□□□□ 0.81
UPF3BQ9BZI7 AL021920.2-201ENST00000624828 1351 ntBASIC20.14■□□□□ 0.81
UPF3BQ9BZI7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
UPF3BQ9BZI7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
UPF3BQ9BZI7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.14■□□□□ 0.81
UPF3BQ9BZI7 AL022342.1-201ENST00000400363 863 ntBASIC20.14■□□□□ 0.81
UPF3BQ9BZI7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
UPF3BQ9BZI7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.14■□□□□ 0.81
UPF3BQ9BZI7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
UPF3BQ9BZI7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
UPF3BQ9BZI7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.14■□□□□ 0.81
UPF3BQ9BZI7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
UPF3BQ9BZI7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UPF3BQ9BZI7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
UPF3BQ9BZI7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC20.14■□□□□ 0.81
UPF3BQ9BZI7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC20.14■□□□□ 0.81
UPF3BQ9BZI7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UPF3BQ9BZI7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
UPF3BQ9BZI7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UPF3BQ9BZI7 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UPF3BQ9BZI7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 LINC00895-201ENST00000629028 1637 ntBASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 AP002490.2-201ENST00000524791 560 ntBASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 AF238378.1-201ENST00000526806 358 ntBASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 AL589182.2-201ENST00000619332 1049 ntBASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UPF3BQ9BZI7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
UPF3BQ9BZI7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
UPF3BQ9BZI7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
UPF3BQ9BZI7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UPF3BQ9BZI7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC20.12■□□□□ 0.81
UPF3BQ9BZI7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UPF3BQ9BZI7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.12■□□□□ 0.81
UPF3BQ9BZI7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.12■□□□□ 0.81
UPF3BQ9BZI7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.12■□□□□ 0.81
UPF3BQ9BZI7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms