Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM62Q9BVG3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM62Q9BVG3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM62Q9BVG3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM62Q9BVG3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TRIM62Q9BVG3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM62Q9BVG3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM62Q9BVG3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM62Q9BVG3 RNU1-129P-201ENST00000384064 167 ntBASIC17.53■□□□□ 0.4
TRIM62Q9BVG3 AC002056.1-201ENST00000395613 760 ntBASIC17.53■□□□□ 0.4
TRIM62Q9BVG3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.53■□□□□ 0.4
TRIM62Q9BVG3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM62Q9BVG3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM62Q9BVG3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.53■□□□□ 0.4
TRIM62Q9BVG3 U1.21-201ENST00000580816 167 ntBASIC17.53■□□□□ 0.4
TRIM62Q9BVG3 AL031055.1-201ENST00000606362 631 ntBASIC17.53■□□□□ 0.4
TRIM62Q9BVG3 AL513190.1-201ENST00000621254 727 ntBASIC17.53■□□□□ 0.4
TRIM62Q9BVG3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM62Q9BVG3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM62Q9BVG3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM62Q9BVG3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM62Q9BVG3 KRT8P39-201ENST00000396270 1433 ntBASIC17.53■□□□□ 0.4
TRIM62Q9BVG3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM62Q9BVG3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM62Q9BVG3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM62Q9BVG3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM62Q9BVG3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM62Q9BVG3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM62Q9BVG3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM62Q9BVG3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM62Q9BVG3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM62Q9BVG3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM62Q9BVG3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM62Q9BVG3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM62Q9BVG3 AC005915.1-201ENST00000624912 2018 ntBASIC17.52■□□□□ 0.4
TRIM62Q9BVG3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM62Q9BVG3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM62Q9BVG3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM62Q9BVG3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM62Q9BVG3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM62Q9BVG3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM62Q9BVG3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM62Q9BVG3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.52■□□□□ 0.4
TRIM62Q9BVG3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM62Q9BVG3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM62Q9BVG3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM62Q9BVG3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM62Q9BVG3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TRIM62Q9BVG3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.52■□□□□ 0.4
TRIM62Q9BVG3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.52■□□□□ 0.4
TRIM62Q9BVG3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM62Q9BVG3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM62Q9BVG3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM62Q9BVG3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM62Q9BVG3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM62Q9BVG3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
TRIM62Q9BVG3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
TRIM62Q9BVG3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM62Q9BVG3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.52■□□□□ 0.39
TRIM62Q9BVG3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
TRIM62Q9BVG3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM62Q9BVG3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.52■□□□□ 0.39
TRIM62Q9BVG3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 AC023274.1-201ENST00000418278 595 ntBASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 BX842568.4-201ENST00000421222 227 ntBASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 AL161645.1-201ENST00000622716 1255 ntBASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 AC092865.6-201ENST00000642101 219 ntBASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM62Q9BVG3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms