Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SHANK2-AS3Q9BTD1 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SHANK2-AS3Q9BTD1 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.02□□□□□ -0.33
SHANK2-AS3Q9BTD1 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.02□□□□□ -0.33
SHANK2-AS3Q9BTD1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SHANK2-AS3Q9BTD1 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SHANK2-AS3Q9BTD1 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SHANK2-AS3Q9BTD1 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.02□□□□□ -0.33
SHANK2-AS3Q9BTD1 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SHANK2-AS3Q9BTD1 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SHANK2-AS3Q9BTD1 MTHFR-217ENST00000641820 1569 ntBASIC13.02□□□□□ -0.33
SHANK2-AS3Q9BTD1 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SHANK2-AS3Q9BTD1 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SHANK2-AS3Q9BTD1 AC079776.2-201ENST00000641154 1609 ntBASIC13.02□□□□□ -0.33
SHANK2-AS3Q9BTD1 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SHANK2-AS3Q9BTD1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SHANK2-AS3Q9BTD1 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.02□□□□□ -0.33
SHANK2-AS3Q9BTD1 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SHANK2-AS3Q9BTD1 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SHANK2-AS3Q9BTD1 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SHANK2-AS3Q9BTD1 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SHANK2-AS3Q9BTD1 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
SHANK2-AS3Q9BTD1 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 PCDHA1-201ENST00000378133 2726 ntBASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 AC104819.1-201ENST00000504587 486 ntBASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 TERC-201ENST00000602385 541 ntBASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 AC013467.2-201ENST00000605472 835 ntBASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 AC243591.1-201ENST00000452967 1364 ntBASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 AC006277.1-201ENST00000624348 1610 ntBASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
SHANK2-AS3Q9BTD1 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SHANK2-AS3Q9BTD1 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
SHANK2-AS3Q9BTD1 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13□□□□□ -0.33
SHANK2-AS3Q9BTD1 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13□□□□□ -0.33
SHANK2-AS3Q9BTD1 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13□□□□□ -0.33
SHANK2-AS3Q9BTD1 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13□□□□□ -0.33
SHANK2-AS3Q9BTD1 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13□□□□□ -0.33
SHANK2-AS3Q9BTD1 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SHANK2-AS3Q9BTD1 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SHANK2-AS3Q9BTD1 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SHANK2-AS3Q9BTD1 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SHANK2-AS3Q9BTD1 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13□□□□□ -0.33
SHANK2-AS3Q9BTD1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SHANK2-AS3Q9BTD1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SHANK2-AS3Q9BTD1 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SHANK2-AS3Q9BTD1 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SHANK2-AS3Q9BTD1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SHANK2-AS3Q9BTD1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SHANK2-AS3Q9BTD1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SHANK2-AS3Q9BTD1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SHANK2-AS3Q9BTD1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13□□□□□ -0.33
SHANK2-AS3Q9BTD1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms