Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VGLL1Q99990 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VGLL1Q99990 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VGLL1Q99990 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC12.85□□□□□ -0.35
VGLL1Q99990 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
VGLL1Q99990 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VGLL1Q99990 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
VGLL1Q99990 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
VGLL1Q99990 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
VGLL1Q99990 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
VGLL1Q99990 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC12.85□□□□□ -0.35
VGLL1Q99990 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC12.85□□□□□ -0.35
VGLL1Q99990 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VGLL1Q99990 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.85□□□□□ -0.35
VGLL1Q99990 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VGLL1Q99990 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
VGLL1Q99990 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VGLL1Q99990 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VGLL1Q99990 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
VGLL1Q99990 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
VGLL1Q99990 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
VGLL1Q99990 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VGLL1Q99990 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
VGLL1Q99990 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VGLL1Q99990 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VGLL1Q99990 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
VGLL1Q99990 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
VGLL1Q99990 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC12.84□□□□□ -0.35
VGLL1Q99990 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC12.84□□□□□ -0.35
VGLL1Q99990 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VGLL1Q99990 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC12.84□□□□□ -0.35
VGLL1Q99990 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VGLL1Q99990 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VGLL1Q99990 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VGLL1Q99990 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VGLL1Q99990 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
VGLL1Q99990 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VGLL1Q99990 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
VGLL1Q99990 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VGLL1Q99990 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
VGLL1Q99990 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VGLL1Q99990 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC12.84□□□□□ -0.35
VGLL1Q99990 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
VGLL1Q99990 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VGLL1Q99990 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC12.84□□□□□ -0.35
VGLL1Q99990 CD9-202ENST00000382515 1229 ntTSL 5 BASIC12.84□□□□□ -0.35
VGLL1Q99990 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC12.84□□□□□ -0.35
VGLL1Q99990 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VGLL1Q99990 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VGLL1Q99990 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC12.84□□□□□ -0.35
VGLL1Q99990 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VGLL1Q99990 KRT8P26-201ENST00000534154 1276 ntBASIC12.84□□□□□ -0.35
VGLL1Q99990 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VGLL1Q99990 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC12.84□□□□□ -0.35
VGLL1Q99990 AD001527.2-201ENST00000622994 785 ntBASIC12.84□□□□□ -0.35
VGLL1Q99990 AC073592.5-201ENST00000624854 528 ntBASIC12.84□□□□□ -0.35
VGLL1Q99990 BANP-204ENST00000393208 2283 ntTSL 2 BASIC12.84□□□□□ -0.35
VGLL1Q99990 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC12.84□□□□□ -0.35
VGLL1Q99990 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC12.84□□□□□ -0.35
VGLL1Q99990 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC12.84□□□□□ -0.35
VGLL1Q99990 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VGLL1Q99990 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VGLL1Q99990 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VGLL1Q99990 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC12.84□□□□□ -0.35
VGLL1Q99990 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
VGLL1Q99990 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
VGLL1Q99990 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
VGLL1Q99990 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VGLL1Q99990 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VGLL1Q99990 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
VGLL1Q99990 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC12.84□□□□□ -0.35
VGLL1Q99990 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VGLL1Q99990 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VGLL1Q99990 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
VGLL1Q99990 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC12.84□□□□□ -0.35
VGLL1Q99990 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC12.84□□□□□ -0.35
VGLL1Q99990 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC12.84□□□□□ -0.35
VGLL1Q99990 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC12.83□□□□□ -0.35
VGLL1Q99990 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
VGLL1Q99990 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC12.83□□□□□ -0.35
VGLL1Q99990 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
VGLL1Q99990 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
VGLL1Q99990 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
VGLL1Q99990 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
VGLL1Q99990 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC12.83□□□□□ -0.35
VGLL1Q99990 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
VGLL1Q99990 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VGLL1Q99990 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VGLL1Q99990 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VGLL1Q99990 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC12.83□□□□□ -0.36
VGLL1Q99990 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
VGLL1Q99990 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VGLL1Q99990 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VGLL1Q99990 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
VGLL1Q99990 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VGLL1Q99990 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
VGLL1Q99990 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VGLL1Q99990 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
VGLL1Q99990 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VGLL1Q99990 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms