Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC19.3■□□□□ 0.68
ARID3AQ99856 AC024909.3-201ENST00000611513 2257 ntBASIC19.3■□□□□ 0.68
ARID3AQ99856 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ARID3AQ99856 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARID3AQ99856 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ARID3AQ99856 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
ARID3AQ99856 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARID3AQ99856 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
ARID3AQ99856 TSPY22P-201ENST00000427496 604 ntBASIC19.3■□□□□ 0.68
ARID3AQ99856 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.3■□□□□ 0.68
ARID3AQ99856 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.3■□□□□ 0.68
ARID3AQ99856 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.3■□□□□ 0.68
ARID3AQ99856 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.3■□□□□ 0.68
ARID3AQ99856 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.3■□□□□ 0.68
ARID3AQ99856 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARID3AQ99856 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.3■□□□□ 0.68
ARID3AQ99856 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ARID3AQ99856 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARID3AQ99856 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.3■□□□□ 0.68
ARID3AQ99856 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARID3AQ99856 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ARID3AQ99856 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
ARID3AQ99856 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARID3AQ99856 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARID3AQ99856 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ARID3AQ99856 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ARID3AQ99856 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC19.29■□□□□ 0.68
ARID3AQ99856 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ARID3AQ99856 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
ARID3AQ99856 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC19.29■□□□□ 0.68
ARID3AQ99856 AC006116.8-202ENST00000587620 1550 ntBASIC19.29■□□□□ 0.68
ARID3AQ99856 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.29■□□□□ 0.68
ARID3AQ99856 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.29■□□□□ 0.68
ARID3AQ99856 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ARID3AQ99856 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ARID3AQ99856 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.29■□□□□ 0.68
ARID3AQ99856 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARID3AQ99856 PCED1CP-201ENST00000419887 785 ntBASIC19.29■□□□□ 0.68
ARID3AQ99856 TSPY12P-201ENST00000421279 868 ntBASIC19.29■□□□□ 0.68
ARID3AQ99856 KRT18P65-201ENST00000439811 1286 ntBASIC19.29■□□□□ 0.68
ARID3AQ99856 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ARID3AQ99856 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
ARID3AQ99856 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.29■□□□□ 0.68
ARID3AQ99856 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ARID3AQ99856 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.29■□□□□ 0.68
ARID3AQ99856 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.29■□□□□ 0.68
ARID3AQ99856 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.29■□□□□ 0.68
ARID3AQ99856 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARID3AQ99856 AC116407.4-201ENST00000623319 1061 ntBASIC19.29■□□□□ 0.68
ARID3AQ99856 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.29■□□□□ 0.68
ARID3AQ99856 AL358472.4-201ENST00000633140 710 ntBASIC19.29■□□□□ 0.68
ARID3AQ99856 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC19.29■□□□□ 0.68
ARID3AQ99856 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ARID3AQ99856 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARID3AQ99856 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARID3AQ99856 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARID3AQ99856 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ARID3AQ99856 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARID3AQ99856 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARID3AQ99856 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ARID3AQ99856 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC19.28■□□□□ 0.68
ARID3AQ99856 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.28■□□□□ 0.68
ARID3AQ99856 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARID3AQ99856 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC19.28■□□□□ 0.68
ARID3AQ99856 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARID3AQ99856 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ARID3AQ99856 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARID3AQ99856 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ARID3AQ99856 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARID3AQ99856 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARID3AQ99856 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ARID3AQ99856 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARID3AQ99856 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ARID3AQ99856 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ARID3AQ99856 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ARID3AQ99856 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.28■□□□□ 0.68
ARID3AQ99856 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.28■□□□□ 0.68
ARID3AQ99856 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.28■□□□□ 0.68
ARID3AQ99856 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.28■□□□□ 0.68
ARID3AQ99856 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.28■□□□□ 0.68
ARID3AQ99856 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.28■□□□□ 0.68
ARID3AQ99856 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARID3AQ99856 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARID3AQ99856 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARID3AQ99856 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARID3AQ99856 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
ARID3AQ99856 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.28■□□□□ 0.68
ARID3AQ99856 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ARID3AQ99856 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARID3AQ99856 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC19.28■□□□□ 0.68
ARID3AQ99856 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ARID3AQ99856 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARID3AQ99856 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARID3AQ99856 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC19.28■□□□□ 0.68
ARID3AQ99856 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC19.28■□□□□ 0.68
ARID3AQ99856 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARID3AQ99856 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARID3AQ99856 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
ARID3AQ99856 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARID3AQ99856 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms