Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
COPS9Q8WXC6 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
COPS9Q8WXC6 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC11.44□□□□□ -0.58
COPS9Q8WXC6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC11.44□□□□□ -0.58
COPS9Q8WXC6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
COPS9Q8WXC6 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 EGFEM1P-202ENST00000431685 1563 ntBASIC11.43□□□□□ -0.58
COPS9Q8WXC6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 MIR663A-201ENST00000385250 93 ntBASIC11.43□□□□□ -0.58
COPS9Q8WXC6 KRT18P29-201ENST00000397031 1267 ntBASIC11.43□□□□□ -0.58
COPS9Q8WXC6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 CR392000.1-201ENST00000624770 1228 ntBASIC11.43□□□□□ -0.58
COPS9Q8WXC6 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 CSPG4P11-201ENST00000560634 4910 ntBASIC11.43□□□□□ -0.58
COPS9Q8WXC6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
COPS9Q8WXC6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 AC002310.6-201ENST00000624451 1377 ntBASIC11.42□□□□□ -0.58
COPS9Q8WXC6 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms