Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.86■□□□□ 0.77
NKX2-3Q8TAU0 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.86■□□□□ 0.77
NKX2-3Q8TAU0 AC091812.2-201ENST00000619081 385 ntBASIC19.86■□□□□ 0.77
NKX2-3Q8TAU0 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKX2-3Q8TAU0 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKX2-3Q8TAU0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKX2-3Q8TAU0 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
NKX2-3Q8TAU0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKX2-3Q8TAU0 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.86■□□□□ 0.77
NKX2-3Q8TAU0 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NKX2-3Q8TAU0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKX2-3Q8TAU0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKX2-3Q8TAU0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 AC131009.4-201ENST00000624048 1740 ntBASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 AC006277.1-201ENST00000624348 1610 ntBASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 TERF1P3-201ENST00000505638 1227 ntBASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 AC023141.13-201ENST00000604991 943 ntBASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 AL391256.1-201ENST00000443260 1855 ntBASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.85■□□□□ 0.77
NKX2-3Q8TAU0 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 AC109322.1-201ENST00000524499 1264 ntBASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 MIR4515-201ENST00000584082 81 ntBASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 CYP2A7P1-201ENST00000595391 815 ntBASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 AL353732.1-201ENST00000569618 1459 ntBASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-3Q8TAU0 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms