Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 STK25P1-201ENST00000585406 838 ntBASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 AL121672.3-201ENST00000608644 468 ntBASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 FRMD8P1-201ENST00000440433 1524 ntBASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
DNAAF1Q8NEP3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 ALOX12P2-203ENST00000570921 1945 ntBASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 AL353593.2-201ENST00000602529 1483 ntBASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 TSPY26P-202ENST00000565928 3884 ntBASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 BX276092.5-203ENST00000456199 560 ntBASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 KRT8P10-201ENST00000450021 1447 ntBASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.9□□□□□ -0.02
DNAAF1Q8NEP3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 CHCHD2P8-201ENST00000429873 447 ntBASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 AL135999.2-201ENST00000622438 1686 ntBASIC14.89□□□□□ -0.03
DNAAF1Q8NEP3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms