Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 AC023511.2-201ENST00000618803 211 ntBASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 AC008735.5-201ENST00000623544 497 ntBASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 AC079328.2-201ENST00000561241 3354 ntBASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 AP002414.1-201ENST00000391405 1147 ntBASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 AL031284.1-201ENST00000419297 478 ntBASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 HLA-A-201ENST00000376802 1334 ntBASIC15.94■□□□□ 0.14
SIMC1Q8NDZ2 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 AC124947.2-201ENST00000547118 1133 ntBASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.93■□□□□ 0.14
SIMC1Q8NDZ2 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms