Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC33Q8N5R6 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC33Q8N5R6 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC33Q8N5R6 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC33Q8N5R6 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC33Q8N5R6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC33Q8N5R6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 HCG4B-203ENST00000450128 991 ntBASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 IGHV3-65-201ENST00000523210 341 ntBASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 MIR4469-201ENST00000583919 79 ntBASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC33Q8N5R6 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 RNF216P1-203ENST00000404404 2427 ntBASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 UBALD1-205ENST00000590891 2641 ntBASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 EGFEM1P-202ENST00000431685 1563 ntBASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 LINC00982-205ENST00000420957 435 ntBASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 KRT18P28-201ENST00000453838 1332 ntBASIC17.72■□□□□ 0.43
CCDC33Q8N5R6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 SNHG9-202ENST00000564014 471 ntBASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms