Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.07■□□□□ 0
LRRC28Q86X40 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
LRRC28Q86X40 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRC28Q86X40 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
LRRC28Q86X40 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRRC28Q86X40 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.07■□□□□ 0
LRRC28Q86X40 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRC28Q86X40 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
LRRC28Q86X40 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRC28Q86X40 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRC28Q86X40 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRC28Q86X40 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.07■□□□□ 0
LRRC28Q86X40 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRC28Q86X40 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRC28Q86X40 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRRC28Q86X40 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
LRRC28Q86X40 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.07■□□□□ 0
LRRC28Q86X40 AL450487.1-201ENST00000426799 995 ntBASIC15.07■□□□□ 0
LRRC28Q86X40 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
LRRC28Q86X40 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.07■□□□□ 0
LRRC28Q86X40 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.07■□□□□ 0
LRRC28Q86X40 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.07■□□□□ 0
LRRC28Q86X40 AC012313.10-201ENST00000623509 926 ntBASIC15.07■□□□□ 0
LRRC28Q86X40 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRC28Q86X40 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
LRRC28Q86X40 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
LRRC28Q86X40 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRRC28Q86X40 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
LRRC28Q86X40 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRC28Q86X40 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRRC28Q86X40 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
LRRC28Q86X40 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
LRRC28Q86X40 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.07■□□□□ 0
LRRC28Q86X40 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.07■□□□□ 0
LRRC28Q86X40 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRC28Q86X40 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRRC28Q86X40 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
LRRC28Q86X40 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
LRRC28Q86X40 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRC28Q86X40 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
LRRC28Q86X40 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.06■□□□□ 0
LRRC28Q86X40 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.06■□□□□ 0
LRRC28Q86X40 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRRC28Q86X40 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRRC28Q86X40 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
LRRC28Q86X40 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.06■□□□□ 0
LRRC28Q86X40 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.06■□□□□ 0
LRRC28Q86X40 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRRC28Q86X40 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.06■□□□□ 0
LRRC28Q86X40 AC092364.2-201ENST00000596710 2692 ntBASIC15.06■□□□□ 0
LRRC28Q86X40 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRRC28Q86X40 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LRRC28Q86X40 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LRRC28Q86X40 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LRRC28Q86X40 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRRC28Q86X40 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
LRRC28Q86X40 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRRC28Q86X40 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRRC28Q86X40 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRRC28Q86X40 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRRC28Q86X40 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRRC28Q86X40 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.06■□□□□ 0
LRRC28Q86X40 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRRC28Q86X40 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.06■□□□□ 0
LRRC28Q86X40 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.06■□□□□ 0
LRRC28Q86X40 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRRC28Q86X40 AL121772.3-201ENST00000610840 674 ntBASIC15.06■□□□□ 0
LRRC28Q86X40 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
LRRC28Q86X40 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LRRC28Q86X40 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
LRRC28Q86X40 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
LRRC28Q86X40 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.06■□□□□ 0
LRRC28Q86X40 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRRC28Q86X40 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRRC28Q86X40 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.06■□□□□ 0
LRRC28Q86X40 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRRC28Q86X40 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.06■□□□□ 0
LRRC28Q86X40 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
LRRC28Q86X40 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRRC28Q86X40 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRRC28Q86X40 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LRRC28Q86X40 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LRRC28Q86X40 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRRC28Q86X40 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.06■□□□□ 0
LRRC28Q86X40 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRRC28Q86X40 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.05■□□□□ 0
LRRC28Q86X40 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.05■□□□□ 0
LRRC28Q86X40 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.05■□□□□ 0
LRRC28Q86X40 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.05■□□□□ 0
LRRC28Q86X40 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LRRC28Q86X40 AC104640.1-201ENST00000562617 2109 ntBASIC15.05■□□□□ 0
LRRC28Q86X40 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.05■□□□□ 0
LRRC28Q86X40 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.05■□□□□ 0
LRRC28Q86X40 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
LRRC28Q86X40 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LRRC28Q86X40 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.05■□□□□ 0
LRRC28Q86X40 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.05■□□□□ -0
LRRC28Q86X40 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRRC28Q86X40 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
LRRC28Q86X40 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms