Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14□□□□□ -0.17
CSMD2Q7Z408 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CSMD2Q7Z408 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14□□□□□ -0.17
CSMD2Q7Z408 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14□□□□□ -0.17
CSMD2Q7Z408 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14□□□□□ -0.17
CSMD2Q7Z408 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14□□□□□ -0.17
CSMD2Q7Z408 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CSMD2Q7Z408 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14□□□□□ -0.17
CSMD2Q7Z408 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14□□□□□ -0.17
CSMD2Q7Z408 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14□□□□□ -0.17
CSMD2Q7Z408 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
CSMD2Q7Z408 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC14□□□□□ -0.17
CSMD2Q7Z408 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14□□□□□ -0.17
CSMD2Q7Z408 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14□□□□□ -0.17
CSMD2Q7Z408 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14□□□□□ -0.17
CSMD2Q7Z408 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CSMD2Q7Z408 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14□□□□□ -0.17
CSMD2Q7Z408 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14□□□□□ -0.17
CSMD2Q7Z408 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CSMD2Q7Z408 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14□□□□□ -0.17
CSMD2Q7Z408 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14□□□□□ -0.17
CSMD2Q7Z408 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14□□□□□ -0.17
CSMD2Q7Z408 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC14□□□□□ -0.17
CSMD2Q7Z408 LINC00304-203ENST00000565008 1864 ntBASIC14□□□□□ -0.17
CSMD2Q7Z408 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CSMD2Q7Z408 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14□□□□□ -0.17
CSMD2Q7Z408 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14□□□□□ -0.17
CSMD2Q7Z408 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CSMD2Q7Z408 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CSMD2Q7Z408 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 HLA-H-201ENST00000383620 1096 ntBASIC13.99□□□□□ -0.17
CSMD2Q7Z408 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 MCC-208ENST00000514701 2855 ntTSL 2 BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 MIR4706-201ENST00000582134 82 ntBASIC13.99□□□□□ -0.17
CSMD2Q7Z408 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 RPS2P36-201ENST00000456516 831 ntBASIC13.99□□□□□ -0.17
CSMD2Q7Z408 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.99□□□□□ -0.17
CSMD2Q7Z408 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 AC106820.2-201ENST00000563775 3264 ntBASIC13.98□□□□□ -0.17
CSMD2Q7Z408 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 FOS-206ENST00000555347 1280 ntTSL 2 BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 NOC2LP1-202ENST00000452600 2235 ntBASIC13.98□□□□□ -0.17
CSMD2Q7Z408 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 AL589987.1-201ENST00000453380 819 ntBASIC13.98□□□□□ -0.17
CSMD2Q7Z408 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 BTNL10-201ENST00000595971 695 ntBASIC13.98□□□□□ -0.17
CSMD2Q7Z408 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD2Q7Z408 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms