Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SHFQ7M4L6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SHFQ7M4L6 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHFQ7M4L6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SHFQ7M4L6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHFQ7M4L6 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.31■□□□□ 0.04
SHFQ7M4L6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SHFQ7M4L6 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SHFQ7M4L6 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SHFQ7M4L6 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.31■□□□□ 0.04
SHFQ7M4L6 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHFQ7M4L6 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SHFQ7M4L6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SHFQ7M4L6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHFQ7M4L6 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SHFQ7M4L6 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHFQ7M4L6 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHFQ7M4L6 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SHFQ7M4L6 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHFQ7M4L6 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHFQ7M4L6 AC003669.1-201ENST00000334569 611 ntBASIC15.3■□□□□ 0.04
SHFQ7M4L6 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHFQ7M4L6 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SHFQ7M4L6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHFQ7M4L6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHFQ7M4L6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHFQ7M4L6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.3■□□□□ 0.04
SHFQ7M4L6 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.3■□□□□ 0.04
SHFQ7M4L6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHFQ7M4L6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHFQ7M4L6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHFQ7M4L6 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHFQ7M4L6 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.3■□□□□ 0.04
SHFQ7M4L6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.3■□□□□ 0.04
SHFQ7M4L6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
SHFQ7M4L6 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.3■□□□□ 0.04
SHFQ7M4L6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SHFQ7M4L6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SHFQ7M4L6 BX276092.5-203ENST00000456199 560 ntBASIC15.3■□□□□ 0.04
SHFQ7M4L6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SHFQ7M4L6 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHFQ7M4L6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.3■□□□□ 0.04
SHFQ7M4L6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHFQ7M4L6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.3■□□□□ 0.04
SHFQ7M4L6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.3■□□□□ 0.04
SHFQ7M4L6 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SHFQ7M4L6 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.3■□□□□ 0.04
SHFQ7M4L6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
SHFQ7M4L6 RN7SL850P-201ENST00000579959 291 ntBASIC15.3■□□□□ 0.04
SHFQ7M4L6 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SHFQ7M4L6 AL121672.3-201ENST00000608644 468 ntBASIC15.3■□□□□ 0.04
SHFQ7M4L6 AC009336.1-201ENST00000608941 1553 ntBASIC15.3■□□□□ 0.04
SHFQ7M4L6 AC024909.3-201ENST00000611513 2257 ntBASIC15.3■□□□□ 0.04
SHFQ7M4L6 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SHFQ7M4L6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SHFQ7M4L6 AC022188.1-201ENST00000620960 1664 ntBASIC15.3■□□□□ 0.04
SHFQ7M4L6 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHFQ7M4L6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.3■□□□□ 0.04
SHFQ7M4L6 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SHFQ7M4L6 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.3■□□□□ 0.04
SHFQ7M4L6 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.3■□□□□ 0.04
SHFQ7M4L6 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
SHFQ7M4L6 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SHFQ7M4L6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHFQ7M4L6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHFQ7M4L6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SHFQ7M4L6 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SHFQ7M4L6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.29■□□□□ 0.04
SHFQ7M4L6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.29■□□□□ 0.04
SHFQ7M4L6 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.29■□□□□ 0.04
SHFQ7M4L6 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.29■□□□□ 0.04
SHFQ7M4L6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SHFQ7M4L6 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SHFQ7M4L6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHFQ7M4L6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.29■□□□□ 0.04
SHFQ7M4L6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHFQ7M4L6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHFQ7M4L6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.29■□□□□ 0.04
SHFQ7M4L6 TMPOP1-202ENST00000424642 1267 ntBASIC15.29■□□□□ 0.04
SHFQ7M4L6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SHFQ7M4L6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.29■□□□□ 0.04
SHFQ7M4L6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.29■□□□□ 0.04
SHFQ7M4L6 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.29■□□□□ 0.04
SHFQ7M4L6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SHFQ7M4L6 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.29■□□□□ 0.04
SHFQ7M4L6 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHFQ7M4L6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.29■□□□□ 0.04
SHFQ7M4L6 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHFQ7M4L6 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
SHFQ7M4L6 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SHFQ7M4L6 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.29■□□□□ 0.04
SHFQ7M4L6 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.29■□□□□ 0.04
SHFQ7M4L6 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHFQ7M4L6 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHFQ7M4L6 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHFQ7M4L6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SHFQ7M4L6 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHFQ7M4L6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.29■□□□□ 0.04
SHFQ7M4L6 AC105917.1-201ENST00000506637 2539 ntBASIC15.28■□□□□ 0.04
SHFQ7M4L6 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms