Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NIPAL3Q6P499 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NIPAL3Q6P499 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NIPAL3Q6P499 PCDHB17P-201ENST00000539533 2393 ntBASIC15.4■□□□□ 0.06
NIPAL3Q6P499 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NIPAL3Q6P499 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NIPAL3Q6P499 HLA-A-202ENST00000376806 1854 ntBASIC15.4■□□□□ 0.06
NIPAL3Q6P499 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.4■□□□□ 0.06
NIPAL3Q6P499 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 CICP6-201ENST00000457191 2729 ntBASIC15.39■□□□□ 0.05
NIPAL3Q6P499 LINC02199-201ENST00000506655 2702 ntBASIC15.39■□□□□ 0.05
NIPAL3Q6P499 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 AC097637.2-201ENST00000624096 1997 ntBASIC15.39■□□□□ 0.05
NIPAL3Q6P499 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.39■□□□□ 0.05
NIPAL3Q6P499 AL662844.4-201ENST00000606367 2838 ntBASIC15.39■□□□□ 0.05
NIPAL3Q6P499 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NIPAL3Q6P499 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms