Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.36□□□□□ -0.11
EFNB3Q15768 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
EFNB3Q15768 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB3Q15768 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB3Q15768 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB3Q15768 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB3Q15768 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB3Q15768 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB3Q15768 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
EFNB3Q15768 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB3Q15768 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB3Q15768 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB3Q15768 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB3Q15768 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB3Q15768 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB3Q15768 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB3Q15768 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB3Q15768 AC141586.5-201ENST00000624546 2050 ntBASIC14.35□□□□□ -0.11
EFNB3Q15768 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB3Q15768 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB3Q15768 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB3Q15768 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
EFNB3Q15768 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB3Q15768 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.35□□□□□ -0.11
EFNB3Q15768 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB3Q15768 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB3Q15768 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
EFNB3Q15768 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB3Q15768 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB3Q15768 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB3Q15768 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB3Q15768 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB3Q15768 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.35□□□□□ -0.11
EFNB3Q15768 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB3Q15768 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB3Q15768 AC004461.1-201ENST00000412461 403 ntBASIC14.35□□□□□ -0.11
EFNB3Q15768 AC092474.2-201ENST00000424288 719 ntBASIC14.35□□□□□ -0.11
EFNB3Q15768 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB3Q15768 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB3Q15768 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB3Q15768 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB3Q15768 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.35□□□□□ -0.11
EFNB3Q15768 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
EFNB3Q15768 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
EFNB3Q15768 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.35□□□□□ -0.11
EFNB3Q15768 AL031055.1-201ENST00000606362 631 ntBASIC14.35□□□□□ -0.11
EFNB3Q15768 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.35□□□□□ -0.11
EFNB3Q15768 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB3Q15768 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB3Q15768 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB3Q15768 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB3Q15768 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.35□□□□□ -0.11
EFNB3Q15768 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB3Q15768 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB3Q15768 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.35□□□□□ -0.11
EFNB3Q15768 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
EFNB3Q15768 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB3Q15768 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
EFNB3Q15768 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.35□□□□□ -0.11
EFNB3Q15768 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.35□□□□□ -0.11
EFNB3Q15768 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
EFNB3Q15768 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
EFNB3Q15768 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNB3Q15768 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB3Q15768 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
EFNB3Q15768 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB3Q15768 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.34□□□□□ -0.11
EFNB3Q15768 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB3Q15768 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB3Q15768 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB3Q15768 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB3Q15768 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.34□□□□□ -0.11
EFNB3Q15768 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB3Q15768 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB3Q15768 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB3Q15768 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.34□□□□□ -0.11
EFNB3Q15768 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.34□□□□□ -0.11
EFNB3Q15768 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB3Q15768 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
EFNB3Q15768 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
EFNB3Q15768 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB3Q15768 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB3Q15768 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB3Q15768 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB3Q15768 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.34□□□□□ -0.11
EFNB3Q15768 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.34□□□□□ -0.11
EFNB3Q15768 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB3Q15768 SPDYE11-202ENST00000450699 704 ntBASIC14.34□□□□□ -0.11
EFNB3Q15768 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.34□□□□□ -0.11
EFNB3Q15768 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
EFNB3Q15768 SPDYE9P-201ENST00000570642 692 ntBASIC14.34□□□□□ -0.11
EFNB3Q15768 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB3Q15768 MIR4492-201ENST00000581627 80 ntBASIC14.34□□□□□ -0.11
EFNB3Q15768 AC027612.4-201ENST00000605371 583 ntBASIC14.34□□□□□ -0.11
EFNB3Q15768 SPDYE10P-202ENST00000612005 668 ntBASIC14.34□□□□□ -0.11
EFNB3Q15768 SPDYE8P-202ENST00000612377 668 ntBASIC14.34□□□□□ -0.11
EFNB3Q15768 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.34□□□□□ -0.11
EFNB3Q15768 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.34□□□□□ -0.11
EFNB3Q15768 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
EFNB3Q15768 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms