Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
UBA52P62987 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.64□□□□□ -0.07
UBA52P62987 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBA52P62987 LINC00304-203ENST00000565008 1864 ntBASIC14.64□□□□□ -0.07
UBA52P62987 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBA52P62987 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBA52P62987 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
UBA52P62987 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.64□□□□□ -0.07
UBA52P62987 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.64□□□□□ -0.07
UBA52P62987 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
UBA52P62987 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
UBA52P62987 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
UBA52P62987 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.64□□□□□ -0.07
UBA52P62987 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.64□□□□□ -0.07
UBA52P62987 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.64□□□□□ -0.07
UBA52P62987 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBA52P62987 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.64□□□□□ -0.07
UBA52P62987 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBA52P62987 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
UBA52P62987 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.64□□□□□ -0.07
UBA52P62987 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.64□□□□□ -0.07
UBA52P62987 AF228730.7-201ENST00000641842 219 ntBASIC14.64□□□□□ -0.07
UBA52P62987 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBA52P62987 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBA52P62987 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.64□□□□□ -0.07
UBA52P62987 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
UBA52P62987 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBA52P62987 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBA52P62987 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBA52P62987 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.64□□□□□ -0.07
UBA52P62987 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.64□□□□□ -0.07
UBA52P62987 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBA52P62987 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBA52P62987 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBA52P62987 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.64□□□□□ -0.07
UBA52P62987 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.64□□□□□ -0.07
UBA52P62987 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBA52P62987 IL9RP2-201ENST00000423948 1312 ntBASIC14.64□□□□□ -0.07
UBA52P62987 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.64□□□□□ -0.07
UBA52P62987 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBA52P62987 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBA52P62987 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
UBA52P62987 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
UBA52P62987 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBA52P62987 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBA52P62987 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBA52P62987 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBA52P62987 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
UBA52P62987 AC005915.1-201ENST00000624912 2018 ntBASIC14.63□□□□□ -0.07
UBA52P62987 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
UBA52P62987 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBA52P62987 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBA52P62987 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBA52P62987 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UBA52P62987 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBA52P62987 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.63□□□□□ -0.07
UBA52P62987 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UBA52P62987 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UBA52P62987 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBA52P62987 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.63□□□□□ -0.07
UBA52P62987 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
UBA52P62987 FAM197Y8-203ENST00000450145 560 ntBASIC14.63□□□□□ -0.07
UBA52P62987 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
UBA52P62987 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.63□□□□□ -0.07
UBA52P62987 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.63□□□□□ -0.07
UBA52P62987 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
UBA52P62987 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.63□□□□□ -0.07
UBA52P62987 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
UBA52P62987 AL591684.3-201ENST00000605187 298 ntBASIC14.63□□□□□ -0.07
UBA52P62987 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UBA52P62987 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBA52P62987 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
UBA52P62987 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBA52P62987 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
UBA52P62987 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.63□□□□□ -0.07
UBA52P62987 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBA52P62987 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UBA52P62987 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBA52P62987 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBA52P62987 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBA52P62987 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBA52P62987 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
UBA52P62987 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBA52P62987 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.62□□□□□ -0.07
UBA52P62987 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBA52P62987 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UBA52P62987 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.62□□□□□ -0.07
UBA52P62987 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.62□□□□□ -0.07
UBA52P62987 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.62□□□□□ -0.07
UBA52P62987 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBA52P62987 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
UBA52P62987 AC024909.3-201ENST00000611513 2257 ntBASIC14.62□□□□□ -0.07
UBA52P62987 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBA52P62987 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBA52P62987 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.62□□□□□ -0.07
UBA52P62987 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBA52P62987 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.62□□□□□ -0.07
UBA52P62987 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBA52P62987 KRT18P13-201ENST00000400056 1290 ntBASIC14.62□□□□□ -0.07
UBA52P62987 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms