Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC13.22□□□□□ -0.29
RAB5BP61020 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB5BP61020 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
RAB5BP61020 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RAB5BP61020 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
RAB5BP61020 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB5BP61020 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.22□□□□□ -0.29
RAB5BP61020 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB5BP61020 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB5BP61020 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB5BP61020 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB5BP61020 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB5BP61020 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB5BP61020 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC13.22□□□□□ -0.29
RAB5BP61020 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC13.22□□□□□ -0.29
RAB5BP61020 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC13.22□□□□□ -0.29
RAB5BP61020 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.22□□□□□ -0.29
RAB5BP61020 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB5BP61020 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.22□□□□□ -0.29
RAB5BP61020 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
RAB5BP61020 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC13.22□□□□□ -0.29
RAB5BP61020 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB5BP61020 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB5BP61020 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB5BP61020 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB5BP61020 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
RAB5BP61020 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAB5BP61020 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.21□□□□□ -0.29
RAB5BP61020 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB5BP61020 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB5BP61020 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB5BP61020 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB5BP61020 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
RAB5BP61020 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAB5BP61020 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB5BP61020 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB5BP61020 AC005912.2-201ENST00000619492 2400 ntBASIC13.21□□□□□ -0.29
RAB5BP61020 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAB5BP61020 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB5BP61020 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB5BP61020 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
RAB5BP61020 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAB5BP61020 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAB5BP61020 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB5BP61020 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC13.21□□□□□ -0.29
RAB5BP61020 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB5BP61020 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC13.21□□□□□ -0.29
RAB5BP61020 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAB5BP61020 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAB5BP61020 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB5BP61020 KRT18P16-201ENST00000510337 1294 ntBASIC13.21□□□□□ -0.29
RAB5BP61020 DUTP2-201ENST00000519164 463 ntBASIC13.21□□□□□ -0.29
RAB5BP61020 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC13.21□□□□□ -0.29
RAB5BP61020 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC13.21□□□□□ -0.29
RAB5BP61020 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC13.21□□□□□ -0.29
RAB5BP61020 GALNS-213ENST00000569433 723 ntTSL 3 BASIC13.21□□□□□ -0.29
RAB5BP61020 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
RAB5BP61020 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
RAB5BP61020 AL136967.2-201ENST00000623968 743 ntBASIC13.21□□□□□ -0.29
RAB5BP61020 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.21□□□□□ -0.29
RAB5BP61020 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.21□□□□□ -0.29
RAB5BP61020 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
RAB5BP61020 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.21□□□□□ -0.29
RAB5BP61020 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB5BP61020 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB5BP61020 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB5BP61020 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
RAB5BP61020 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RAB5BP61020 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.3
RAB5BP61020 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
RAB5BP61020 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.21□□□□□ -0.3
RAB5BP61020 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
RAB5BP61020 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
RAB5BP61020 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.21□□□□□ -0.3
RAB5BP61020 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.21□□□□□ -0.3
RAB5BP61020 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
RAB5BP61020 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.21□□□□□ -0.3
RAB5BP61020 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
RAB5BP61020 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
RAB5BP61020 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB5BP61020 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RAB5BP61020 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB5BP61020 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB5BP61020 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB5BP61020 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB5BP61020 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RAB5BP61020 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC13.2□□□□□ -0.3
RAB5BP61020 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB5BP61020 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAB5BP61020 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB5BP61020 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB5BP61020 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB5BP61020 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB5BP61020 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB5BP61020 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAB5BP61020 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB5BP61020 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RAB5BP61020 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB5BP61020 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAB5BP61020 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms