Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH6P55285 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CDH6P55285 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH6P55285 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH6P55285 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH6P55285 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH6P55285 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH6P55285 TOP3BP1-201ENST00000420768 1380 ntBASIC17.56■□□□□ 0.4
CDH6P55285 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH6P55285 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH6P55285 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH6P55285 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CDH6P55285 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH6P55285 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH6P55285 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
CDH6P55285 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH6P55285 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH6P55285 KRT18P67-201ENST00000432816 1264 ntBASIC17.56■□□□□ 0.4
CDH6P55285 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.56■□□□□ 0.4
CDH6P55285 AC018712.1-201ENST00000455767 687 ntBASIC17.56■□□□□ 0.4
CDH6P55285 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CDH6P55285 AC136632.2-201ENST00000512891 861 ntBASIC17.56■□□□□ 0.4
CDH6P55285 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH6P55285 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH6P55285 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.56■□□□□ 0.4
CDH6P55285 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CDH6P55285 AC008735.5-201ENST00000623544 497 ntBASIC17.56■□□□□ 0.4
CDH6P55285 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH6P55285 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH6P55285 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH6P55285 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH6P55285 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH6P55285 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CDH6P55285 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH6P55285 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH6P55285 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH6P55285 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH6P55285 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH6P55285 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH6P55285 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH6P55285 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH6P55285 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
CDH6P55285 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH6P55285 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH6P55285 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
CDH6P55285 PCDHB19P-201ENST00000570871 2371 ntBASIC17.55■□□□□ 0.4
CDH6P55285 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH6P55285 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH6P55285 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
CDH6P55285 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH6P55285 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CDH6P55285 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH6P55285 AC006277.1-201ENST00000624348 1610 ntBASIC17.55■□□□□ 0.4
CDH6P55285 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH6P55285 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CDH6P55285 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CDH6P55285 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH6P55285 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDH6P55285 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH6P55285 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH6P55285 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH6P55285 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH6P55285 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH6P55285 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH6P55285 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH6P55285 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.55■□□□□ 0.4
CDH6P55285 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.55■□□□□ 0.4
CDH6P55285 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.55■□□□□ 0.4
CDH6P55285 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.55■□□□□ 0.4
CDH6P55285 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH6P55285 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.55■□□□□ 0.4
CDH6P55285 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.55■□□□□ 0.4
CDH6P55285 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH6P55285 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.55■□□□□ 0.4
CDH6P55285 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH6P55285 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH6P55285 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH6P55285 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH6P55285 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CDH6P55285 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH6P55285 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.55■□□□□ 0.4
CDH6P55285 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH6P55285 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CDH6P55285 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH6P55285 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH6P55285 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH6P55285 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH6P55285 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH6P55285 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.54■□□□□ 0.4
CDH6P55285 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CDH6P55285 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH6P55285 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.54■□□□□ 0.4
CDH6P55285 SLC25A6P2-201ENST00000497974 877 ntBASIC17.54■□□□□ 0.4
CDH6P55285 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.54■□□□□ 0.4
CDH6P55285 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.54■□□□□ 0.4
CDH6P55285 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH6P55285 AL160237.2-201ENST00000556165 472 ntBASIC17.54■□□□□ 0.4
CDH6P55285 AC105339.3-201ENST00000560043 636 ntBASIC17.54■□□□□ 0.4
CDH6P55285 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH6P55285 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms