Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ATP1B3P54709 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.7□□□□□ -0.06
ATP1B3P54709 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ATP1B3P54709 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATP1B3P54709 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
ATP1B3P54709 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATP1B3P54709 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATP1B3P54709 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATP1B3P54709 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.7□□□□□ -0.06
ATP1B3P54709 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
ATP1B3P54709 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
ATP1B3P54709 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
ATP1B3P54709 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ATP1B3P54709 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.7□□□□□ -0.06
ATP1B3P54709 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.7□□□□□ -0.06
ATP1B3P54709 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
ATP1B3P54709 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.7□□□□□ -0.06
ATP1B3P54709 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.7□□□□□ -0.06
ATP1B3P54709 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.7□□□□□ -0.06
ATP1B3P54709 AP002490.2-201ENST00000524791 560 ntBASIC14.7□□□□□ -0.06
ATP1B3P54709 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.7□□□□□ -0.06
ATP1B3P54709 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ATP1B3P54709 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.7□□□□□ -0.06
ATP1B3P54709 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATP1B3P54709 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
ATP1B3P54709 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.7□□□□□ -0.06
ATP1B3P54709 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
ATP1B3P54709 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.7□□□□□ -0.06
ATP1B3P54709 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.7□□□□□ -0.06
ATP1B3P54709 FRMD8P1-201ENST00000440433 1524 ntBASIC14.7□□□□□ -0.06
ATP1B3P54709 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ATP1B3P54709 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATP1B3P54709 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
ATP1B3P54709 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATP1B3P54709 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
ATP1B3P54709 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.7□□□□□ -0.06
ATP1B3P54709 AC007950.2-201ENST00000615045 2347 ntBASIC14.7□□□□□ -0.06
ATP1B3P54709 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
ATP1B3P54709 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATP1B3P54709 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATP1B3P54709 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
ATP1B3P54709 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATP1B3P54709 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.69□□□□□ -0.06
ATP1B3P54709 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.69□□□□□ -0.06
ATP1B3P54709 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATP1B3P54709 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.69□□□□□ -0.06
ATP1B3P54709 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
ATP1B3P54709 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.69□□□□□ -0.06
ATP1B3P54709 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
ATP1B3P54709 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
ATP1B3P54709 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.69□□□□□ -0.06
ATP1B3P54709 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATP1B3P54709 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATP1B3P54709 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
ATP1B3P54709 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
ATP1B3P54709 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATP1B3P54709 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATP1B3P54709 ACTG1P4-201ENST00000425123 1122 ntBASIC14.69□□□□□ -0.06
ATP1B3P54709 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.69□□□□□ -0.06
ATP1B3P54709 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATP1B3P54709 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.69□□□□□ -0.06
ATP1B3P54709 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATP1B3P54709 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.69□□□□□ -0.06
ATP1B3P54709 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.69□□□□□ -0.06
ATP1B3P54709 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.69□□□□□ -0.06
ATP1B3P54709 AC012615.1-201ENST00000565797 1299 ntBASIC14.69□□□□□ -0.06
ATP1B3P54709 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.69□□□□□ -0.06
ATP1B3P54709 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATP1B3P54709 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATP1B3P54709 AC092329.2-201ENST00000598402 547 ntBASIC14.69□□□□□ -0.06
ATP1B3P54709 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.69□□□□□ -0.06
ATP1B3P54709 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATP1B3P54709 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
ATP1B3P54709 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
ATP1B3P54709 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
ATP1B3P54709 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.69□□□□□ -0.06
ATP1B3P54709 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.69□□□□□ -0.06
ATP1B3P54709 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATP1B3P54709 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATP1B3P54709 TSPY26P-202ENST00000565928 3884 ntBASIC14.69□□□□□ -0.06
ATP1B3P54709 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.69□□□□□ -0.06
ATP1B3P54709 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.69□□□□□ -0.06
ATP1B3P54709 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATP1B3P54709 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATP1B3P54709 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATP1B3P54709 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
ATP1B3P54709 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATP1B3P54709 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATP1B3P54709 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATP1B3P54709 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
ATP1B3P54709 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATP1B3P54709 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATP1B3P54709 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
ATP1B3P54709 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ATP1B3P54709 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.68□□□□□ -0.06
ATP1B3P54709 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.68□□□□□ -0.06
ATP1B3P54709 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATP1B3P54709 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ATP1B3P54709 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATP1B3P54709 TUBB8P12-201ENST00000308911 1335 ntBASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms