Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
NUP98P52948 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NUP98P52948 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUP98P52948 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
NUP98P52948 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUP98P52948 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUP98P52948 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUP98P52948 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
NUP98P52948 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
NUP98P52948 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
NUP98P52948 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NUP98P52948 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NUP98P52948 RPS19-201ENST00000221975 500 ntTSL 3 BASIC20.7■□□□□ 0.9
NUP98P52948 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NUP98P52948 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
NUP98P52948 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC20.7■□□□□ 0.9
NUP98P52948 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC20.7■□□□□ 0.9
NUP98P52948 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NUP98P52948 NAA38-207ENST00000576861 556 ntTSL 3 BASIC20.7■□□□□ 0.9
NUP98P52948 AC140912.1-201ENST00000577171 1054 ntBASIC20.7■□□□□ 0.9
NUP98P52948 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
NUP98P52948 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC20.7■□□□□ 0.9
NUP98P52948 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUP98P52948 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NUP98P52948 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
NUP98P52948 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
NUP98P52948 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC20.7■□□□□ 0.9
NUP98P52948 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUP98P52948 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NUP98P52948 GPAA1P2-202ENST00000606848 1787 ntBASIC20.7■□□□□ 0.9
NUP98P52948 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUP98P52948 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NUP98P52948 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUP98P52948 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
NUP98P52948 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC20.69■□□□□ 0.9
NUP98P52948 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NUP98P52948 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC20.69■□□□□ 0.9
NUP98P52948 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC20.69■□□□□ 0.9
NUP98P52948 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUP98P52948 AL589739.1-201ENST00000607720 493 ntBASIC20.69■□□□□ 0.9
NUP98P52948 AC004233.3-201ENST00000607794 1269 ntBASIC20.69■□□□□ 0.9
NUP98P52948 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC20.69■□□□□ 0.9
NUP98P52948 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
NUP98P52948 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUP98P52948 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.69■□□□□ 0.9
NUP98P52948 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUP98P52948 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NUP98P52948 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.69■□□□□ 0.9
NUP98P52948 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.69■□□□□ 0.9
NUP98P52948 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUP98P52948 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
NUP98P52948 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUP98P52948 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
NUP98P52948 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUP98P52948 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUP98P52948 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUP98P52948 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUP98P52948 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUP98P52948 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC20.69■□□□□ 0.9
NUP98P52948 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.69■□□□□ 0.9
NUP98P52948 HLA-J-202ENST00000469281 1241 ntBASIC20.69■□□□□ 0.9
NUP98P52948 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC20.69■□□□□ 0.9
NUP98P52948 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUP98P52948 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.69■□□□□ 0.9
NUP98P52948 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC20.69■□□□□ 0.9
NUP98P52948 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NUP98P52948 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
NUP98P52948 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NUP98P52948 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NUP98P52948 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
NUP98P52948 AL645608.8-201ENST00000606034 2086 ntBASIC20.68■□□□□ 0.9
NUP98P52948 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
NUP98P52948 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NUP98P52948 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NUP98P52948 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUP98P52948 AC139713.2-201ENST00000641328 2723 ntBASIC20.68■□□□□ 0.9
NUP98P52948 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NUP98P52948 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.68■□□□□ 0.9
NUP98P52948 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NUP98P52948 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUP98P52948 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUP98P52948 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC20.68■□□□□ 0.9
NUP98P52948 AP002490.2-201ENST00000524791 560 ntBASIC20.68■□□□□ 0.9
NUP98P52948 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NUP98P52948 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC20.68■□□□□ 0.9
NUP98P52948 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUP98P52948 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUP98P52948 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUP98P52948 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
NUP98P52948 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC20.68■□□□□ 0.9
NUP98P52948 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.68■□□□□ 0.9
NUP98P52948 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUP98P52948 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC20.68■□□□□ 0.9
NUP98P52948 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NUP98P52948 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC20.67■□□□□ 0.9
NUP98P52948 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUP98P52948 AC098859.1-201ENST00000502915 1238 ntBASIC20.67■□□□□ 0.9
NUP98P52948 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC20.67■□□□□ 0.9
NUP98P52948 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC20.67■□□□□ 0.9
NUP98P52948 AC027307.3-201ENST00000594262 1100 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms