Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGA2P52926 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HMGA2P52926 AC096582.2-201ENST00000510860 516 ntBASIC15.41■□□□□ 0.06
HMGA2P52926 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGA2P52926 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.41■□□□□ 0.06
HMGA2P52926 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.41■□□□□ 0.06
HMGA2P52926 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.41■□□□□ 0.06
HMGA2P52926 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.41■□□□□ 0.06
HMGA2P52926 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.41■□□□□ 0.06
HMGA2P52926 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HMGA2P52926 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGA2P52926 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGA2P52926 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HMGA2P52926 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGA2P52926 KRT8P39-201ENST00000396270 1433 ntBASIC15.41■□□□□ 0.06
HMGA2P52926 AC006449.6-201ENST00000612330 2296 ntBASIC15.41■□□□□ 0.06
HMGA2P52926 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.41■□□□□ 0.06
HMGA2P52926 AC005332.1-201ENST00000577698 1310 ntBASIC15.41■□□□□ 0.06
HMGA2P52926 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGA2P52926 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.41■□□□□ 0.06
HMGA2P52926 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMGA2P52926 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGA2P52926 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMGA2P52926 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
HMGA2P52926 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.4■□□□□ 0.06
HMGA2P52926 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGA2P52926 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMGA2P52926 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.4■□□□□ 0.06
HMGA2P52926 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGA2P52926 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.4■□□□□ 0.06
HMGA2P52926 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
HMGA2P52926 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
HMGA2P52926 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
HMGA2P52926 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGA2P52926 AP002383.4-201ENST00000442518 975 ntBASIC15.4■□□□□ 0.06
HMGA2P52926 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.4■□□□□ 0.06
HMGA2P52926 TSSC2-201ENST00000450217 709 ntBASIC15.4■□□□□ 0.06
HMGA2P52926 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.4■□□□□ 0.06
HMGA2P52926 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMGA2P52926 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.4■□□□□ 0.06
HMGA2P52926 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.4■□□□□ 0.06
HMGA2P52926 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.4■□□□□ 0.06
HMGA2P52926 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGA2P52926 AL590326.2-201ENST00000625139 305 ntBASIC15.4■□□□□ 0.06
HMGA2P52926 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGA2P52926 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.4■□□□□ 0.06
HMGA2P52926 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMGA2P52926 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMGA2P52926 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMGA2P52926 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.4■□□□□ 0.06
HMGA2P52926 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMGA2P52926 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGA2P52926 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGA2P52926 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.39■□□□□ 0.05
HMGA2P52926 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
HMGA2P52926 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
HMGA2P52926 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HMGA2P52926 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HMGA2P52926 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.39■□□□□ 0.05
HMGA2P52926 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGA2P52926 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.39■□□□□ 0.05
HMGA2P52926 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HMGA2P52926 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HMGA2P52926 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
HMGA2P52926 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.39■□□□□ 0.05
HMGA2P52926 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGA2P52926 AL031731.1-201ENST00000642131 2094 ntBASIC15.39■□□□□ 0.05
HMGA2P52926 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
HMGA2P52926 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGA2P52926 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.39■□□□□ 0.05
HMGA2P52926 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HMGA2P52926 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGA2P52926 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.39■□□□□ 0.05
HMGA2P52926 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGA2P52926 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.39■□□□□ 0.05
HMGA2P52926 AC104640.1-201ENST00000562617 2109 ntBASIC15.39■□□□□ 0.05
HMGA2P52926 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.39■□□□□ 0.05
HMGA2P52926 AC116407.4-201ENST00000623319 1061 ntBASIC15.39■□□□□ 0.05
HMGA2P52926 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGA2P52926 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGA2P52926 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HMGA2P52926 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGA2P52926 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGA2P52926 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGA2P52926 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.39■□□□□ 0.05
HMGA2P52926 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HMGA2P52926 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGA2P52926 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HMGA2P52926 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.39■□□□□ 0.05
HMGA2P52926 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HMGA2P52926 AC103702.1-201ENST00000548801 2630 ntBASIC15.39■□□□□ 0.05
HMGA2P52926 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGA2P52926 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
HMGA2P52926 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGA2P52926 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HMGA2P52926 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGA2P52926 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGA2P52926 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
HMGA2P52926 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGA2P52926 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms