Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HOXC12P31275 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HOXC12P31275 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15□□□□□ -0.01
HOXC12P31275 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15□□□□□ -0.01
HOXC12P31275 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15□□□□□ -0.01
HOXC12P31275 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15□□□□□ -0.01
HOXC12P31275 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15□□□□□ -0.01
HOXC12P31275 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15□□□□□ -0.01
HOXC12P31275 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.99□□□□□ -0.01
HOXC12P31275 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC12P31275 LINC00896-202ENST00000609602 2128 ntBASIC14.99□□□□□ -0.01
HOXC12P31275 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC12P31275 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.99□□□□□ -0.01
HOXC12P31275 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC12P31275 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
HOXC12P31275 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.99□□□□□ -0.01
HOXC12P31275 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
HOXC12P31275 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC12P31275 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC12P31275 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC12P31275 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.99□□□□□ -0.01
HOXC12P31275 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC12P31275 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC12P31275 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.99□□□□□ -0.01
HOXC12P31275 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
HOXC12P31275 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC12P31275 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC12P31275 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.99□□□□□ -0.01
HOXC12P31275 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC12P31275 MIR770-201ENST00000390219 98 ntBASIC14.99□□□□□ -0.01
HOXC12P31275 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC12P31275 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.99□□□□□ -0.01
HOXC12P31275 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC12P31275 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.99□□□□□ -0.01
HOXC12P31275 PRSS29P-201ENST00000440800 595 ntBASIC14.99□□□□□ -0.01
HOXC12P31275 ALG1L5P-201ENST00000482043 771 ntBASIC14.99□□□□□ -0.01
HOXC12P31275 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.99□□□□□ -0.01
HOXC12P31275 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.99□□□□□ -0.01
HOXC12P31275 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.99□□□□□ -0.01
HOXC12P31275 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.99□□□□□ -0.01
HOXC12P31275 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.99□□□□□ -0.01
HOXC12P31275 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.99□□□□□ -0.01
HOXC12P31275 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
HOXC12P31275 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
HOXC12P31275 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.99□□□□□ -0.01
HOXC12P31275 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
HOXC12P31275 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC12P31275 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC12P31275 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
HOXC12P31275 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
HOXC12P31275 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
HOXC12P31275 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.99□□□□□ -0.01
HOXC12P31275 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
HOXC12P31275 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.99□□□□□ -0.01
HOXC12P31275 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC12P31275 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
HOXC12P31275 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC12P31275 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC12P31275 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.99□□□□□ -0.01
HOXC12P31275 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
HOXC12P31275 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.99□□□□□ -0.01
HOXC12P31275 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC12P31275 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.98□□□□□ -0.01
HOXC12P31275 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC12P31275 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC12P31275 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC12P31275 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC12P31275 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC12P31275 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HOXC12P31275 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC12P31275 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC12P31275 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC12P31275 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HOXC12P31275 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.98□□□□□ -0.01
HOXC12P31275 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC12P31275 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.98□□□□□ -0.01
HOXC12P31275 AC011467.4-201ENST00000594891 528 ntBASIC14.98□□□□□ -0.01
HOXC12P31275 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HOXC12P31275 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC12P31275 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.98□□□□□ -0.01
HOXC12P31275 CROCCP2-202ENST00000412962 2773 ntBASIC14.98□□□□□ -0.01
HOXC12P31275 AL023806.1-201ENST00000603994 1649 ntBASIC14.98□□□□□ -0.01
HOXC12P31275 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC12P31275 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC12P31275 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.98□□□□□ -0.01
HOXC12P31275 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.98□□□□□ -0.01
HOXC12P31275 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.98□□□□□ -0.01
HOXC12P31275 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.98□□□□□ -0.01
HOXC12P31275 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC12P31275 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC12P31275 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HOXC12P31275 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC12P31275 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC12P31275 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC12P31275 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
HOXC12P31275 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC12P31275 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.97□□□□□ -0.01
HOXC12P31275 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC12P31275 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.97□□□□□ -0.01
HOXC12P31275 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms