Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.2■□□□□ 0.5
HOXC8P31273 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.2■□□□□ 0.5
HOXC8P31273 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC8P31273 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
HOXC8P31273 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC8P31273 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC8P31273 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
HOXC8P31273 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC8P31273 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.2■□□□□ 0.5
HOXC8P31273 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC8P31273 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC8P31273 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC8P31273 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
HOXC8P31273 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.19■□□□□ 0.5
HOXC8P31273 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC8P31273 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
HOXC8P31273 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.19■□□□□ 0.5
HOXC8P31273 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.19■□□□□ 0.5
HOXC8P31273 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC8P31273 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.19■□□□□ 0.5
HOXC8P31273 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.19■□□□□ 0.5
HOXC8P31273 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC8P31273 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC8P31273 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.19■□□□□ 0.5
HOXC8P31273 CR383656.12-201ENST00000549567 513 ntBASIC18.19■□□□□ 0.5
HOXC8P31273 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.19■□□□□ 0.5
HOXC8P31273 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC8P31273 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
HOXC8P31273 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.19■□□□□ 0.5
HOXC8P31273 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.19■□□□□ 0.5
HOXC8P31273 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HOXC8P31273 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.19■□□□□ 0.5
HOXC8P31273 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.19■□□□□ 0.5
HOXC8P31273 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC8P31273 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
HOXC8P31273 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC8P31273 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC8P31273 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC8P31273 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC8P31273 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
HOXC8P31273 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC8P31273 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.18■□□□□ 0.5
HOXC8P31273 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC8P31273 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
HOXC8P31273 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
HOXC8P31273 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC8P31273 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.18■□□□□ 0.5
HOXC8P31273 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC8P31273 AL645728.1-201ENST00000366221 2101 ntBASIC18.18■□□□□ 0.5
HOXC8P31273 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.18■□□□□ 0.5
HOXC8P31273 AL079307.3-201ENST00000556114 283 ntBASIC18.18■□□□□ 0.5
HOXC8P31273 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.18■□□□□ 0.5
HOXC8P31273 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.18■□□□□ 0.5
HOXC8P31273 AL589739.1-201ENST00000607720 493 ntBASIC18.18■□□□□ 0.5
HOXC8P31273 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.18■□□□□ 0.5
HOXC8P31273 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.18■□□□□ 0.5
HOXC8P31273 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC8P31273 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC8P31273 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.18■□□□□ 0.5
HOXC8P31273 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC8P31273 AL391256.1-201ENST00000443260 1855 ntBASIC18.18■□□□□ 0.5
HOXC8P31273 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC8P31273 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC8P31273 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC8P31273 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC8P31273 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC8P31273 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC8P31273 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
HOXC8P31273 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC8P31273 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
HOXC8P31273 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC8P31273 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.17■□□□□ 0.5
HOXC8P31273 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC8P31273 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
HOXC8P31273 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
HOXC8P31273 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.17■□□□□ 0.5
HOXC8P31273 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC8P31273 RNA5SP410-201ENST00000516285 106 ntBASIC18.17■□□□□ 0.5
HOXC8P31273 AP002490.2-201ENST00000524791 560 ntBASIC18.17■□□□□ 0.5
HOXC8P31273 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.17■□□□□ 0.5
HOXC8P31273 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.17■□□□□ 0.5
HOXC8P31273 AL596325.1-201ENST00000563991 1082 ntBASIC18.17■□□□□ 0.5
HOXC8P31273 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
HOXC8P31273 AC004840.1-201ENST00000636359 365 ntBASIC18.17■□□□□ 0.5
HOXC8P31273 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC8P31273 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.17■□□□□ 0.5
HOXC8P31273 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC8P31273 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC8P31273 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC8P31273 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC8P31273 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC8P31273 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
HOXC8P31273 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.17■□□□□ 0.5
HOXC8P31273 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC8P31273 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC8P31273 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC8P31273 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
HOXC8P31273 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC8P31273 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC8P31273 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms