Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.51■□□□□ 0.71
ERCC3P19447 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC3P19447 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC3P19447 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC3P19447 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ERCC3P19447 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC3P19447 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.51■□□□□ 0.71
ERCC3P19447 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC3P19447 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC3P19447 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC3P19447 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC3P19447 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC3P19447 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.51■□□□□ 0.71
ERCC3P19447 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC3P19447 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.51■□□□□ 0.71
ERCC3P19447 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
ERCC3P19447 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
ERCC3P19447 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
ERCC3P19447 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
ERCC3P19447 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.5■□□□□ 0.71
ERCC3P19447 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ERCC3P19447 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ERCC3P19447 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ERCC3P19447 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ERCC3P19447 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ERCC3P19447 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ERCC3P19447 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ERCC3P19447 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.5■□□□□ 0.71
ERCC3P19447 FAM58DP-201ENST00000428076 619 ntBASIC19.5■□□□□ 0.71
ERCC3P19447 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.5■□□□□ 0.71
ERCC3P19447 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.5■□□□□ 0.71
ERCC3P19447 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ERCC3P19447 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.5■□□□□ 0.71
ERCC3P19447 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.5■□□□□ 0.71
ERCC3P19447 DUX4L27-201ENST00000554796 1261 ntBASIC19.5■□□□□ 0.71
ERCC3P19447 DUX4L17-201ENST00000557360 1267 ntBASIC19.5■□□□□ 0.71
ERCC3P19447 RARRES2P8-201ENST00000566335 367 ntBASIC19.5■□□□□ 0.71
ERCC3P19447 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.5■□□□□ 0.71
ERCC3P19447 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
ERCC3P19447 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.5■□□□□ 0.71
ERCC3P19447 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ERCC3P19447 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ERCC3P19447 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC3P19447 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC3P19447 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC3P19447 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC3P19447 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC3P19447 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC3P19447 AC069335.1-201ENST00000489972 472 ntBASIC19.49■□□□□ 0.71
ERCC3P19447 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC3P19447 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.49■□□□□ 0.71
ERCC3P19447 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC3P19447 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC3P19447 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.49■□□□□ 0.71
ERCC3P19447 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.49■□□□□ 0.71
ERCC3P19447 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
ERCC3P19447 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC3P19447 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
ERCC3P19447 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.49■□□□□ 0.71
ERCC3P19447 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC3P19447 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ERCC3P19447 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC3P19447 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC3P19447 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
ERCC3P19447 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC3P19447 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC3P19447 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC3P19447 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC3P19447 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC3P19447 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC3P19447 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC3P19447 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.48■□□□□ 0.71
ERCC3P19447 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC3P19447 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC3P19447 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.48■□□□□ 0.71
ERCC3P19447 KRT18P32-201ENST00000424695 1287 ntBASIC19.48■□□□□ 0.71
ERCC3P19447 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.48■□□□□ 0.71
ERCC3P19447 AC067863.1-201ENST00000494933 530 ntBASIC19.48■□□□□ 0.71
ERCC3P19447 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.48■□□□□ 0.71
ERCC3P19447 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.48■□□□□ 0.71
ERCC3P19447 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.48■□□□□ 0.71
ERCC3P19447 AC005412.3-201ENST00000580309 715 ntBASIC19.48■□□□□ 0.71
ERCC3P19447 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.48■□□□□ 0.71
ERCC3P19447 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.48■□□□□ 0.71
ERCC3P19447 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.48■□□□□ 0.71
ERCC3P19447 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC3P19447 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC3P19447 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
ERCC3P19447 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC3P19447 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.48■□□□□ 0.71
ERCC3P19447 AKAP8P1-201ENST00000434743 1349 ntBASIC19.48■□□□□ 0.71
ERCC3P19447 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC3P19447 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC3P19447 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ERCC3P19447 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ERCC3P19447 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
ERCC3P19447 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.48■□□□□ 0.71
ERCC3P19447 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.48■□□□□ 0.71
ERCC3P19447 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ERCC3P19447 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms