Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1DP16402 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST1H1DP16402 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1DP16402 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST1H1DP16402 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1DP16402 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1DP16402 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1DP16402 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1DP16402 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1DP16402 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1DP16402 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1DP16402 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.35□□□□□ -0.11
HIST1H1DP16402 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.35□□□□□ -0.11
HIST1H1DP16402 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1DP16402 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.35□□□□□ -0.11
HIST1H1DP16402 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1DP16402 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HIST1H1DP16402 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HIST1H1DP16402 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1DP16402 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1DP16402 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.35□□□□□ -0.11
HIST1H1DP16402 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1DP16402 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HIST1H1DP16402 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.35□□□□□ -0.11
HIST1H1DP16402 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1DP16402 AL596257.1-201ENST00000641463 2694 ntBASIC14.35□□□□□ -0.11
HIST1H1DP16402 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1DP16402 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1DP16402 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST1H1DP16402 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST1H1DP16402 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1DP16402 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1DP16402 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1DP16402 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.35□□□□□ -0.11
HIST1H1DP16402 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1DP16402 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.34□□□□□ -0.11
HIST1H1DP16402 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1DP16402 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1DP16402 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST1H1DP16402 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1DP16402 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1DP16402 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1DP16402 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1DP16402 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1DP16402 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.34□□□□□ -0.11
HIST1H1DP16402 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
HIST1H1DP16402 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HIST1H1DP16402 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1DP16402 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1DP16402 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1DP16402 AC024909.3-201ENST00000611513 2257 ntBASIC14.34□□□□□ -0.11
HIST1H1DP16402 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HIST1H1DP16402 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1DP16402 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1DP16402 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.34□□□□□ -0.11
HIST1H1DP16402 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1DP16402 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1DP16402 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1DP16402 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.34□□□□□ -0.11
HIST1H1DP16402 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1DP16402 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1DP16402 AP002414.1-201ENST00000391405 1147 ntBASIC14.34□□□□□ -0.11
HIST1H1DP16402 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.34□□□□□ -0.11
HIST1H1DP16402 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.34□□□□□ -0.11
HIST1H1DP16402 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.34□□□□□ -0.11
HIST1H1DP16402 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.34□□□□□ -0.11
HIST1H1DP16402 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC14.34□□□□□ -0.11
HIST1H1DP16402 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1DP16402 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1DP16402 AC063952.2-201ENST00000498792 1227 ntBASIC14.34□□□□□ -0.11
HIST1H1DP16402 KRT8P26-201ENST00000534154 1276 ntBASIC14.34□□□□□ -0.11
HIST1H1DP16402 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC14.34□□□□□ -0.11
HIST1H1DP16402 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.34□□□□□ -0.11
HIST1H1DP16402 AL139011.1-202ENST00000642063 584 ntBASIC14.34□□□□□ -0.11
HIST1H1DP16402 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST1H1DP16402 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
HIST1H1DP16402 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1DP16402 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
HIST1H1DP16402 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1DP16402 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1DP16402 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1DP16402 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1DP16402 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1DP16402 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST1H1DP16402 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1DP16402 PMPCAP1-201ENST00000508114 1576 ntBASIC14.34□□□□□ -0.11
HIST1H1DP16402 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1DP16402 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
HIST1H1DP16402 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
HIST1H1DP16402 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1DP16402 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H1DP16402 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
HIST1H1DP16402 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HIST1H1DP16402 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HIST1H1DP16402 KRT8P49-201ENST00000604166 1432 ntBASIC14.33□□□□□ -0.11
HIST1H1DP16402 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
HIST1H1DP16402 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
HIST1H1DP16402 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.33□□□□□ -0.11
HIST1H1DP16402 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HIST1H1DP16402 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms