Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16■□□□□ 0.15
NCK1P16333 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16■□□□□ 0.15
NCK1P16333 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16■□□□□ 0.15
NCK1P16333 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NCK1P16333 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
NCK1P16333 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NCK1P16333 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NCK1P16333 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NCK1P16333 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.99■□□□□ 0.15
NCK1P16333 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.99■□□□□ 0.15
NCK1P16333 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.99■□□□□ 0.15
NCK1P16333 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.99■□□□□ 0.15
NCK1P16333 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NCK1P16333 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NCK1P16333 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.99■□□□□ 0.15
NCK1P16333 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NCK1P16333 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NCK1P16333 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NCK1P16333 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NCK1P16333 KLF4P1-201ENST00000412782 1185 ntBASIC15.99■□□□□ 0.15
NCK1P16333 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
NCK1P16333 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.99■□□□□ 0.15
NCK1P16333 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.99■□□□□ 0.15
NCK1P16333 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.99■□□□□ 0.15
NCK1P16333 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.99■□□□□ 0.15
NCK1P16333 AL592071.1-201ENST00000611956 408 ntBASIC15.99■□□□□ 0.15
NCK1P16333 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
NCK1P16333 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
NCK1P16333 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NCK1P16333 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
NCK1P16333 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
NCK1P16333 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NCK1P16333 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NCK1P16333 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NCK1P16333 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
NCK1P16333 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NCK1P16333 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.99■□□□□ 0.15
NCK1P16333 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
NCK1P16333 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NCK1P16333 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NCK1P16333 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NCK1P16333 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NCK1P16333 AC144831.1-201ENST00000573312 2656 ntBASIC15.99■□□□□ 0.15
NCK1P16333 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
NCK1P16333 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.99■□□□□ 0.15
NCK1P16333 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.99■□□□□ 0.15
NCK1P16333 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NCK1P16333 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NCK1P16333 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NCK1P16333 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
NCK1P16333 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
NCK1P16333 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NCK1P16333 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NCK1P16333 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.98■□□□□ 0.15
NCK1P16333 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NCK1P16333 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NCK1P16333 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NCK1P16333 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NCK1P16333 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
NCK1P16333 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.98■□□□□ 0.15
NCK1P16333 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.98■□□□□ 0.15
NCK1P16333 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NCK1P16333 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NCK1P16333 AC003669.1-201ENST00000334569 611 ntBASIC15.98■□□□□ 0.15
NCK1P16333 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
NCK1P16333 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
NCK1P16333 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.98■□□□□ 0.15
NCK1P16333 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.98■□□□□ 0.15
NCK1P16333 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NCK1P16333 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.98■□□□□ 0.15
NCK1P16333 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.98■□□□□ 0.15
NCK1P16333 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.98■□□□□ 0.15
NCK1P16333 DUX4L17-201ENST00000557360 1267 ntBASIC15.98■□□□□ 0.15
NCK1P16333 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NCK1P16333 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
NCK1P16333 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.98■□□□□ 0.15
NCK1P16333 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.98■□□□□ 0.15
NCK1P16333 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NCK1P16333 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
NCK1P16333 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NCK1P16333 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NCK1P16333 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NCK1P16333 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.98■□□□□ 0.15
NCK1P16333 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.98■□□□□ 0.15
NCK1P16333 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NCK1P16333 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
NCK1P16333 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NCK1P16333 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NCK1P16333 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NCK1P16333 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NCK1P16333 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NCK1P16333 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NCK1P16333 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NCK1P16333 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.97■□□□□ 0.15
NCK1P16333 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NCK1P16333 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NCK1P16333 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
NCK1P16333 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NCK1P16333 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
NCK1P16333 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms