Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL11A2P13942 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL11A2P13942 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL11A2P13942 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL11A2P13942 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL11A2P13942 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL11A2P13942 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL11A2P13942 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
COL11A2P13942 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COL11A2P13942 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC20.27■□□□□ 0.84
COL11A2P13942 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC20.27■□□□□ 0.84
COL11A2P13942 AP005482.1-201ENST00000563722 1273 ntBASIC20.27■□□□□ 0.84
COL11A2P13942 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC20.27■□□□□ 0.84
COL11A2P13942 AC010319.3-201ENST00000597028 470 ntBASIC20.27■□□□□ 0.84
COL11A2P13942 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.27■□□□□ 0.84
COL11A2P13942 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
COL11A2P13942 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL11A2P13942 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COL11A2P13942 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL11A2P13942 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
COL11A2P13942 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL11A2P13942 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COL11A2P13942 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL11A2P13942 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
COL11A2P13942 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC20.27■□□□□ 0.83
COL11A2P13942 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
COL11A2P13942 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
COL11A2P13942 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
COL11A2P13942 AC093726.1-201ENST00000608064 963 ntBASIC20.27■□□□□ 0.83
COL11A2P13942 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
COL11A2P13942 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.27■□□□□ 0.83
COL11A2P13942 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.26■□□□□ 0.83
COL11A2P13942 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL11A2P13942 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL11A2P13942 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL11A2P13942 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL11A2P13942 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
COL11A2P13942 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.26■□□□□ 0.83
COL11A2P13942 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC20.26■□□□□ 0.83
COL11A2P13942 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL11A2P13942 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC20.26■□□□□ 0.83
COL11A2P13942 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC20.26■□□□□ 0.83
COL11A2P13942 MFF-223ENST00000524634 647 ntTSL 2 BASIC20.26■□□□□ 0.83
COL11A2P13942 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC20.26■□□□□ 0.83
COL11A2P13942 USB1-203ENST00000539737 1212 ntTSL 2 BASIC20.26■□□□□ 0.83
COL11A2P13942 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
COL11A2P13942 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC20.26■□□□□ 0.83
COL11A2P13942 AC024267.1-201ENST00000582320 895 ntBASIC20.26■□□□□ 0.83
COL11A2P13942 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL11A2P13942 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC20.26■□□□□ 0.83
COL11A2P13942 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL11A2P13942 AC006277.1-201ENST00000624348 1610 ntBASIC20.26■□□□□ 0.83
COL11A2P13942 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL11A2P13942 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.26■□□□□ 0.83
COL11A2P13942 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL11A2P13942 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL11A2P13942 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
COL11A2P13942 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL11A2P13942 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL11A2P13942 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
COL11A2P13942 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.25■□□□□ 0.83
COL11A2P13942 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.25■□□□□ 0.83
COL11A2P13942 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC20.25■□□□□ 0.83
COL11A2P13942 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC20.25■□□□□ 0.83
COL11A2P13942 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
COL11A2P13942 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC20.25■□□□□ 0.83
COL11A2P13942 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL11A2P13942 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
COL11A2P13942 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL11A2P13942 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.25■□□□□ 0.83
COL11A2P13942 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL11A2P13942 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
COL11A2P13942 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.25■□□□□ 0.83
COL11A2P13942 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL11A2P13942 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.25■□□□□ 0.83
COL11A2P13942 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
COL11A2P13942 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
COL11A2P13942 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL11A2P13942 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL11A2P13942 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL11A2P13942 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL11A2P13942 AC135050.7-201ENST00000624508 2218 ntBASIC20.25■□□□□ 0.83
COL11A2P13942 PACS1-203ENST00000524815 628 ntTSL 4 BASIC20.24■□□□□ 0.83
COL11A2P13942 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL11A2P13942 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL11A2P13942 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL11A2P13942 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC20.24■□□□□ 0.83
COL11A2P13942 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL11A2P13942 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL11A2P13942 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.24■□□□□ 0.83
COL11A2P13942 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL11A2P13942 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL11A2P13942 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL11A2P13942 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL11A2P13942 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL11A2P13942 CLK3P2-201ENST00000427566 1453 ntBASIC20.24■□□□□ 0.83
COL11A2P13942 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
COL11A2P13942 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.24■□□□□ 0.83
COL11A2P13942 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL11A2P13942 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms