Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
DEFA4P12838 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DEFA4P12838 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
DEFA4P12838 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.8□□□□□ -0.2
DEFA4P12838 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.8□□□□□ -0.2
DEFA4P12838 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
DEFA4P12838 TSPY26P-202ENST00000565928 3884 ntBASIC13.8□□□□□ -0.2
DEFA4P12838 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DEFA4P12838 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DEFA4P12838 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DEFA4P12838 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DEFA4P12838 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC13.8□□□□□ -0.2
DEFA4P12838 AC078925.2-201ENST00000624013 1973 ntBASIC13.8□□□□□ -0.2
DEFA4P12838 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DEFA4P12838 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DEFA4P12838 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
DEFA4P12838 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.79□□□□□ -0.2
DEFA4P12838 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
DEFA4P12838 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
DEFA4P12838 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
DEFA4P12838 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DEFA4P12838 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
DEFA4P12838 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.79□□□□□ -0.2
DEFA4P12838 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC13.79□□□□□ -0.2
DEFA4P12838 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DEFA4P12838 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DEFA4P12838 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.79□□□□□ -0.2
DEFA4P12838 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
DEFA4P12838 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DEFA4P12838 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.79□□□□□ -0.2
DEFA4P12838 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
DEFA4P12838 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.79□□□□□ -0.2
DEFA4P12838 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DEFA4P12838 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
DEFA4P12838 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DEFA4P12838 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DEFA4P12838 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DEFA4P12838 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DEFA4P12838 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DEFA4P12838 AC122714.2-201ENST00000502787 707 ntBASIC13.79□□□□□ -0.2
DEFA4P12838 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.79□□□□□ -0.2
DEFA4P12838 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC13.79□□□□□ -0.2
DEFA4P12838 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.79□□□□□ -0.2
DEFA4P12838 AL138831.2-201ENST00000606564 490 ntBASIC13.79□□□□□ -0.2
DEFA4P12838 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
DEFA4P12838 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.79□□□□□ -0.2
DEFA4P12838 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13.79□□□□□ -0.2
DEFA4P12838 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.79□□□□□ -0.2
DEFA4P12838 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
DEFA4P12838 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DEFA4P12838 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DEFA4P12838 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DEFA4P12838 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
DEFA4P12838 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DEFA4P12838 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DEFA4P12838 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
DEFA4P12838 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
DEFA4P12838 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
DEFA4P12838 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
DEFA4P12838 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
DEFA4P12838 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC13.79□□□□□ -0.2
DEFA4P12838 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.79□□□□□ -0.2
DEFA4P12838 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DEFA4P12838 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.78□□□□□ -0.2
DEFA4P12838 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
DEFA4P12838 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
DEFA4P12838 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
DEFA4P12838 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
DEFA4P12838 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
DEFA4P12838 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC13.78□□□□□ -0.2
DEFA4P12838 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.78□□□□□ -0.2
DEFA4P12838 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.78□□□□□ -0.2
DEFA4P12838 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
DEFA4P12838 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DEFA4P12838 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DEFA4P12838 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DEFA4P12838 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.78□□□□□ -0.2
DEFA4P12838 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.78□□□□□ -0.2
DEFA4P12838 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.78□□□□□ -0.2
DEFA4P12838 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
DEFA4P12838 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DEFA4P12838 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
DEFA4P12838 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.78□□□□□ -0.2
DEFA4P12838 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DEFA4P12838 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
DEFA4P12838 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13.78□□□□□ -0.2
DEFA4P12838 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DEFA4P12838 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.78□□□□□ -0.2
DEFA4P12838 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC13.78□□□□□ -0.2
DEFA4P12838 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DEFA4P12838 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
DEFA4P12838 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
DEFA4P12838 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC13.78□□□□□ -0.2
DEFA4P12838 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.78□□□□□ -0.2
DEFA4P12838 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
DEFA4P12838 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.78□□□□□ -0.2
DEFA4P12838 AC016734.2-201ENST00000624325 1377 ntBASIC13.78□□□□□ -0.2
DEFA4P12838 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DEFA4P12838 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DEFA4P12838 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms