Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 SLC25A39P2-201ENST00000537614 270 ntBASIC18.41■□□□□ 0.54
VTNP04004 KRT8P23-201ENST00000560090 1207 ntBASIC18.41■□□□□ 0.54
VTNP04004 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VTNP04004 AL138918.1-201ENST00000568306 659 ntBASIC18.41■□□□□ 0.54
VTNP04004 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.41■□□□□ 0.54
VTNP04004 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.41■□□□□ 0.54
VTNP04004 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VTNP04004 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
VTNP04004 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.41■□□□□ 0.54
VTNP04004 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VTNP04004 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
VTNP04004 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VTNP04004 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VTNP04004 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
VTNP04004 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VTNP04004 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
VTNP04004 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VTNP04004 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
VTNP04004 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
VTNP04004 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.41■□□□□ 0.54
VTNP04004 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VTNP04004 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.4■□□□□ 0.54
VTNP04004 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.4■□□□□ 0.54
VTNP04004 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VTNP04004 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VTNP04004 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VTNP04004 AC005332.8-201ENST00000622750 2735 ntBASIC18.4■□□□□ 0.54
VTNP04004 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VTNP04004 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.4■□□□□ 0.54
VTNP04004 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VTNP04004 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VTNP04004 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VTNP04004 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VTNP04004 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VTNP04004 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VTNP04004 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VTNP04004 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VTNP04004 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
VTNP04004 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VTNP04004 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.4■□□□□ 0.54
VTNP04004 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VTNP04004 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.4■□□□□ 0.54
VTNP04004 DUX4L27-201ENST00000554796 1261 ntBASIC18.4■□□□□ 0.54
VTNP04004 AC005498.2-205ENST00000593218 784 ntBASIC18.4■□□□□ 0.54
VTNP04004 LINC02084-201ENST00000606069 1096 ntBASIC18.4■□□□□ 0.54
VTNP04004 AP001059.3-201ENST00000619053 235 ntBASIC18.4■□□□□ 0.54
VTNP04004 AC008267.7-201ENST00000624570 1194 ntBASIC18.4■□□□□ 0.54
VTNP04004 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.4■□□□□ 0.54
VTNP04004 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VTNP04004 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VTNP04004 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
VTNP04004 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
VTNP04004 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.4■□□□□ 0.54
VTNP04004 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VTNP04004 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VTNP04004 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VTNP04004 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VTNP04004 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VTNP04004 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.4■□□□□ 0.54
VTNP04004 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
VTNP04004 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
VTNP04004 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
VTNP04004 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VTNP04004 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
VTNP04004 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.39■□□□□ 0.54
VTNP04004 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VTNP04004 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VTNP04004 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VTNP04004 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
VTNP04004 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VTNP04004 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VTNP04004 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.39■□□□□ 0.53
VTNP04004 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.39■□□□□ 0.53
VTNP04004 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.39■□□□□ 0.53
VTNP04004 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.39■□□□□ 0.53
VTNP04004 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.39■□□□□ 0.53
VTNP04004 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.39■□□□□ 0.53
VTNP04004 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.39■□□□□ 0.53
VTNP04004 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.39■□□□□ 0.53
VTNP04004 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VTNP04004 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.39■□□□□ 0.53
VTNP04004 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VTNP04004 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
VTNP04004 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.39■□□□□ 0.53
VTNP04004 AC021097.1-201ENST00000607902 574 ntBASIC18.39■□□□□ 0.53
VTNP04004 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
VTNP04004 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
VTNP04004 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
VTNP04004 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VTNP04004 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
VTNP04004 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
VTNP04004 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.39■□□□□ 0.53
VTNP04004 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VTNP04004 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VTNP04004 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VTNP04004 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.39■□□□□ 0.53
VTNP04004 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
VTNP04004 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VTNP04004 PCDHB18P-201ENST00000524813 2368 ntBASIC18.38■□□□□ 0.53
VTNP04004 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms