Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 PON3-205ENST00000451904 1053 ntTSL 3 BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 PENK-204ENST00000518770 863 ntTSL 2 BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 AL512604.3-201ENST00000569583 964 ntBASIC12.3□□□□□ -0.44
TNFRSF6BO95407 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 AC019129.2-201ENST00000609837 1235 ntBASIC12.3□□□□□ -0.44
TNFRSF6BO95407 AC026471.5-201ENST00000615068 467 ntBASIC12.3□□□□□ -0.44
TNFRSF6BO95407 AC113410.3-201ENST00000623366 203 ntBASIC12.3□□□□□ -0.44
TNFRSF6BO95407 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 AC097374.2-201ENST00000618617 1306 ntBASIC12.3□□□□□ -0.44
TNFRSF6BO95407 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 AC010460.3-201ENST00000511359 1579 ntBASIC12.3□□□□□ -0.44
TNFRSF6BO95407 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TNFRSF6BO95407 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TNFRSF6BO95407 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TNFRSF6BO95407 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TNFRSF6BO95407 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TNFRSF6BO95407 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TNFRSF6BO95407 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TNFRSF6BO95407 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TNFRSF6BO95407 AL596087.1-201ENST00000400979 1969 ntBASIC12.29□□□□□ -0.44
TNFRSF6BO95407 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
TNFRSF6BO95407 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TNFRSF6BO95407 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TNFRSF6BO95407 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TNFRSF6BO95407 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TNFRSF6BO95407 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TNFRSF6BO95407 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC12.29□□□□□ -0.44
TNFRSF6BO95407 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TNFRSF6BO95407 Telomerase-vert.1-201ENST00000363312 438 ntBASIC12.29□□□□□ -0.44
TNFRSF6BO95407 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TNFRSF6BO95407 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TNFRSF6BO95407 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TNFRSF6BO95407 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
TNFRSF6BO95407 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TNFRSF6BO95407 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC12.29□□□□□ -0.44
TNFRSF6BO95407 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TNFRSF6BO95407 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
TNFRSF6BO95407 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TNFRSF6BO95407 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TNFRSF6BO95407 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms