Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A3O75365 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A3O75365 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A3O75365 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A3O75365 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A3O75365 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PTP4A3O75365 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A3O75365 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.22■□□□□ 0.03
PTP4A3O75365 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A3O75365 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A3O75365 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.22■□□□□ 0.03
PTP4A3O75365 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTP4A3O75365 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTP4A3O75365 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTP4A3O75365 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.21■□□□□ 0.03
PTP4A3O75365 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.21■□□□□ 0.03
PTP4A3O75365 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTP4A3O75365 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PTP4A3O75365 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.21■□□□□ 0.03
PTP4A3O75365 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PTP4A3O75365 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PTP4A3O75365 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PTP4A3O75365 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PTP4A3O75365 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTP4A3O75365 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PTP4A3O75365 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTP4A3O75365 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PTP4A3O75365 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PTP4A3O75365 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.21■□□□□ 0.03
PTP4A3O75365 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTP4A3O75365 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PTP4A3O75365 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTP4A3O75365 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PTP4A3O75365 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.21■□□□□ 0.03
PTP4A3O75365 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PTP4A3O75365 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PTP4A3O75365 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTP4A3O75365 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTP4A3O75365 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.21■□□□□ 0.03
PTP4A3O75365 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.21■□□□□ 0.03
PTP4A3O75365 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.21■□□□□ 0.03
PTP4A3O75365 MIR4492-201ENST00000581627 80 ntBASIC15.21■□□□□ 0.03
PTP4A3O75365 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.21■□□□□ 0.03
PTP4A3O75365 AL732292.2-201ENST00000609649 430 ntBASIC15.21■□□□□ 0.03
PTP4A3O75365 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.21■□□□□ 0.03
PTP4A3O75365 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTP4A3O75365 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.21■□□□□ 0.03
PTP4A3O75365 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PTP4A3O75365 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PTP4A3O75365 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTP4A3O75365 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PTP4A3O75365 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PTP4A3O75365 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
PTP4A3O75365 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.21■□□□□ 0.02
PTP4A3O75365 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
PTP4A3O75365 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTP4A3O75365 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTP4A3O75365 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTP4A3O75365 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PTP4A3O75365 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTP4A3O75365 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTP4A3O75365 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTP4A3O75365 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTP4A3O75365 MTHFR-217ENST00000641820 1569 ntBASIC15.2■□□□□ 0.02
PTP4A3O75365 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTP4A3O75365 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.2■□□□□ 0.02
PTP4A3O75365 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTP4A3O75365 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTP4A3O75365 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.2■□□□□ 0.02
PTP4A3O75365 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.2■□□□□ 0.02
PTP4A3O75365 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
PTP4A3O75365 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTP4A3O75365 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PTP4A3O75365 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.2■□□□□ 0.02
PTP4A3O75365 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTP4A3O75365 ARMC10P1-201ENST00000313754 855 ntBASIC15.2■□□□□ 0.02
PTP4A3O75365 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTP4A3O75365 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTP4A3O75365 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.2■□□□□ 0.02
PTP4A3O75365 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.2■□□□□ 0.02
PTP4A3O75365 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.2■□□□□ 0.02
PTP4A3O75365 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.2■□□□□ 0.02
PTP4A3O75365 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.2■□□□□ 0.02
PTP4A3O75365 AL445228.2-201ENST00000605589 952 ntBASIC15.2■□□□□ 0.02
PTP4A3O75365 AL355877.3-201ENST00000622820 899 ntBASIC15.2■□□□□ 0.02
PTP4A3O75365 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.2■□□□□ 0.02
PTP4A3O75365 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.2■□□□□ 0.02
PTP4A3O75365 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTP4A3O75365 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.2■□□□□ 0.02
PTP4A3O75365 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTP4A3O75365 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.2■□□□□ 0.02
PTP4A3O75365 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.2■□□□□ 0.02
PTP4A3O75365 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
PTP4A3O75365 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.2■□□□□ 0.02
PTP4A3O75365 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
PTP4A3O75365 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.2■□□□□ 0.02
PTP4A3O75365 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTP4A3O75365 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.19■□□□□ 0.02
PTP4A3O75365 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTP4A3O75365 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms