Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HCN1O60741 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
HCN1O60741 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HCN1O60741 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HCN1O60741 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HCN1O60741 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HCN1O60741 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.84■□□□□ 0.13
HCN1O60741 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
HCN1O60741 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
HCN1O60741 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HCN1O60741 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.83■□□□□ 0.13
HCN1O60741 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
HCN1O60741 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.83■□□□□ 0.13
HCN1O60741 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HCN1O60741 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
HCN1O60741 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HCN1O60741 AC132938.5-201ENST00000624980 1813 ntBASIC15.83■□□□□ 0.12
HCN1O60741 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HCN1O60741 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.83■□□□□ 0.12
HCN1O60741 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.83■□□□□ 0.12
HCN1O60741 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
HCN1O60741 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HCN1O60741 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.83■□□□□ 0.12
HCN1O60741 AC098831.1-202ENST00000438821 336 ntBASIC15.83■□□□□ 0.12
HCN1O60741 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.83■□□□□ 0.12
HCN1O60741 SIGLEC30P-201ENST00000455569 941 ntBASIC15.83■□□□□ 0.12
HCN1O60741 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
HCN1O60741 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.83■□□□□ 0.12
HCN1O60741 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.83■□□□□ 0.12
HCN1O60741 AC109462.3-201ENST00000573934 613 ntBASIC15.83■□□□□ 0.12
HCN1O60741 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
HCN1O60741 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.83■□□□□ 0.12
HCN1O60741 AL671883.3-201ENST00000603274 991 ntBASIC15.83■□□□□ 0.12
HCN1O60741 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HCN1O60741 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HCN1O60741 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.83■□□□□ 0.12
HCN1O60741 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HCN1O60741 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HCN1O60741 MST1L-201ENST00000442552 2185 ntBASIC15.83■□□□□ 0.12
HCN1O60741 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HCN1O60741 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HCN1O60741 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HCN1O60741 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
HCN1O60741 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCN1O60741 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCN1O60741 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCN1O60741 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HCN1O60741 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
HCN1O60741 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCN1O60741 AC060834.1-201ENST00000443027 2032 ntBASIC15.82■□□□□ 0.12
HCN1O60741 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCN1O60741 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HCN1O60741 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HCN1O60741 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCN1O60741 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCN1O60741 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
HCN1O60741 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCN1O60741 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
HCN1O60741 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HCN1O60741 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCN1O60741 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.82■□□□□ 0.12
HCN1O60741 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.82■□□□□ 0.12
HCN1O60741 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.82■□□□□ 0.12
HCN1O60741 AC012640.2-201ENST00000561606 901 ntBASIC15.82■□□□□ 0.12
HCN1O60741 AC023511.2-201ENST00000618803 211 ntBASIC15.82■□□□□ 0.12
HCN1O60741 MIR1199-201ENST00000621445 119 ntBASIC15.82■□□□□ 0.12
HCN1O60741 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCN1O60741 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
HCN1O60741 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
HCN1O60741 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCN1O60741 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCN1O60741 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCN1O60741 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.82■□□□□ 0.12
HCN1O60741 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCN1O60741 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCN1O60741 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCN1O60741 LINC02012-201ENST00000608206 1725 ntBASIC15.82■□□□□ 0.12
HCN1O60741 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCN1O60741 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
HCN1O60741 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCN1O60741 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCN1O60741 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCN1O60741 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HCN1O60741 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.81■□□□□ 0.12
HCN1O60741 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCN1O60741 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCN1O60741 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCN1O60741 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCN1O60741 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCN1O60741 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCN1O60741 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCN1O60741 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCN1O60741 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.81■□□□□ 0.12
HCN1O60741 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HCN1O60741 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HCN1O60741 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCN1O60741 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
HCN1O60741 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.81■□□□□ 0.12
HCN1O60741 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.81■□□□□ 0.12
HCN1O60741 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms