Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A1O00337 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A1O00337 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC28A1O00337 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SLC28A1O00337 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SLC28A1O00337 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
SLC28A1O00337 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
SLC28A1O00337 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC28A1O00337 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SLC28A1O00337 AL356309.3-201ENST00000624132 1934 ntBASIC16.27■□□□□ 0.19
SLC28A1O00337 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC28A1O00337 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.27■□□□□ 0.19
SLC28A1O00337 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.27■□□□□ 0.19
SLC28A1O00337 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SLC28A1O00337 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
SLC28A1O00337 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC28A1O00337 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.27■□□□□ 0.19
SLC28A1O00337 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.27■□□□□ 0.19
SLC28A1O00337 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SLC28A1O00337 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC28A1O00337 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC28A1O00337 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SLC28A1O00337 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A1O00337 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A1O00337 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC28A1O00337 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
SLC28A1O00337 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A1O00337 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
SLC28A1O00337 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A1O00337 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC28A1O00337 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A1O00337 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A1O00337 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A1O00337 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A1O00337 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.26■□□□□ 0.19
SLC28A1O00337 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A1O00337 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.26■□□□□ 0.19
SLC28A1O00337 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC28A1O00337 FOSL1P1-201ENST00000511041 816 ntBASIC16.26■□□□□ 0.19
SLC28A1O00337 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.26■□□□□ 0.19
SLC28A1O00337 AL139424.1-201ENST00000607572 797 ntBASIC16.26■□□□□ 0.19
SLC28A1O00337 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A1O00337 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SLC28A1O00337 AC093458.2-201ENST00000623150 629 ntBASIC16.26■□□□□ 0.19
SLC28A1O00337 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
SLC28A1O00337 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A1O00337 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A1O00337 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
SLC28A1O00337 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A1O00337 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
SLC28A1O00337 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
SLC28A1O00337 AL513523.2-202ENST00000427283 2040 ntBASIC16.26■□□□□ 0.19
SLC28A1O00337 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A1O00337 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A1O00337 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC28A1O00337 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC28A1O00337 TOP3BP1-201ENST00000420768 1380 ntBASIC16.26■□□□□ 0.19
SLC28A1O00337 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SLC28A1O00337 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A1O00337 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A1O00337 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SLC28A1O00337 ALOX12P2-203ENST00000570921 1945 ntBASIC16.25■□□□□ 0.19
SLC28A1O00337 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A1O00337 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A1O00337 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.25■□□□□ 0.19
SLC28A1O00337 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC28A1O00337 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC28A1O00337 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A1O00337 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A1O00337 AL391005.1-201ENST00000623953 2435 ntBASIC16.25■□□□□ 0.19
SLC28A1O00337 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A1O00337 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A1O00337 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A1O00337 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A1O00337 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
SLC28A1O00337 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC28A1O00337 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A1O00337 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A1O00337 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A1O00337 ARMC10P1-201ENST00000313754 855 ntBASIC16.25■□□□□ 0.19
SLC28A1O00337 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A1O00337 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A1O00337 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.25■□□□□ 0.19
SLC28A1O00337 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC28A1O00337 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC28A1O00337 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SLC28A1O00337 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A1O00337 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
SLC28A1O00337 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A1O00337 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A1O00337 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A1O00337 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A1O00337 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A1O00337 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC28A1O00337 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SLC28A1O00337 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A1O00337 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A1O00337 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A1O00337 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC28A1O00337 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms