Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AL353801.3-201ENST00000609898 542 ntBASIC14.74□□□□□ -0.05
SHISA3A0PJX4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 CROCCP1-201ENST00000426910 5675 ntBASIC14.73□□□□□ -0.05
SHISA3A0PJX4 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 AC003669.1-201ENST00000334569 611 ntBASIC14.73□□□□□ -0.05
SHISA3A0PJX4 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.73□□□□□ -0.05
SHISA3A0PJX4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 AC011558.1-201ENST00000623459 338 ntBASIC14.73□□□□□ -0.05
SHISA3A0PJX4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.73□□□□□ -0.05
SHISA3A0PJX4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 SNX33P1-201ENST00000592116 1762 ntBASIC14.73□□□□□ -0.05
SHISA3A0PJX4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHISA3A0PJX4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 AL359075.1-203ENST00000462729 1002 ntBASIC14.72□□□□□ -0.05
SHISA3A0PJX4 RN7SL606P-201ENST00000472779 293 ntBASIC14.72□□□□□ -0.05
SHISA3A0PJX4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 AD001527.2-201ENST00000622994 785 ntBASIC14.72□□□□□ -0.05
SHISA3A0PJX4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 AC006277.1-201ENST00000624348 1610 ntBASIC14.72□□□□□ -0.05
SHISA3A0PJX4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHISA3A0PJX4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
SHISA3A0PJX4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHISA3A0PJX4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SHISA3A0PJX4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.71□□□□□ -0.05
SHISA3A0PJX4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
SHISA3A0PJX4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHISA3A0PJX4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.71□□□□□ -0.05
SHISA3A0PJX4 PRAL-201ENST00000624952 3286 ntBASIC14.71□□□□□ -0.05
SHISA3A0PJX4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.71□□□□□ -0.05
SHISA3A0PJX4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHISA3A0PJX4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SHISA3A0PJX4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms