Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
TCRBV3S1A0A5B6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TCRBV3S1A0A5B6 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TCRBV3S1A0A5B6 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 KLF4P1-201ENST00000412782 1185 ntBASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 AC140113.3-201ENST00000605663 199 ntBASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TCRBV3S1A0A5B6 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 CDC14C-201ENST00000428251 1719 ntBASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 AC005336.2-201ENST00000593183 939 ntBASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 PPT1-215ENST00000641471 2368 ntBASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TCRBV3S1A0A5B6 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 KRT17P2-201ENST00000300992 1314 ntBASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 MIR718-201ENST00000390190 70 ntBASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 RNF126P1-202ENST00000569893 925 ntBASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 AD001527.2-201ENST00000622994 785 ntBASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms