Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF103-CHMP3A0A140T963 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF103-CHMP3A0A140T963 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF103-CHMP3A0A140T963 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF103-CHMP3A0A140T963 KRT8P10-201ENST00000450021 1447 ntBASIC16.35■□□□□ 0.21
RNF103-CHMP3A0A140T963 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF103-CHMP3A0A140T963 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF103-CHMP3A0A140T963 AC078925.2-201ENST00000624013 1973 ntBASIC16.35■□□□□ 0.21
RNF103-CHMP3A0A140T963 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 PAUPAR-201ENST00000630360 2965 ntBASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 AC009533.2-201ENST00000543664 586 ntBASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
RNF103-CHMP3A0A140T963 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF103-CHMP3A0A140T963 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.33■□□□□ 0.21
RNF103-CHMP3A0A140T963 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF103-CHMP3A0A140T963 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF103-CHMP3A0A140T963 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF103-CHMP3A0A140T963 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF103-CHMP3A0A140T963 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.33■□□□□ 0.21
RNF103-CHMP3A0A140T963 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF103-CHMP3A0A140T963 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
RNF103-CHMP3A0A140T963 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF103-CHMP3A0A140T963 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.33■□□□□ 0.2
RNF103-CHMP3A0A140T963 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF103-CHMP3A0A140T963 FAM86EP-206ENST00000510506 987 ntBASIC16.33■□□□□ 0.2
RNF103-CHMP3A0A140T963 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF103-CHMP3A0A140T963 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.33■□□□□ 0.2
RNF103-CHMP3A0A140T963 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RNF103-CHMP3A0A140T963 STK25P1-201ENST00000585406 838 ntBASIC16.33■□□□□ 0.2
RNF103-CHMP3A0A140T963 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.33■□□□□ 0.2
RNF103-CHMP3A0A140T963 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF103-CHMP3A0A140T963 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF103-CHMP3A0A140T963 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RNF103-CHMP3A0A140T963 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
RNF103-CHMP3A0A140T963 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.33■□□□□ 0.2
RNF103-CHMP3A0A140T963 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RNF103-CHMP3A0A140T963 AC022188.1-201ENST00000620960 1664 ntBASIC16.33■□□□□ 0.2
RNF103-CHMP3A0A140T963 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF103-CHMP3A0A140T963 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF103-CHMP3A0A140T963 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF103-CHMP3A0A140T963 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF103-CHMP3A0A140T963 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF103-CHMP3A0A140T963 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF103-CHMP3A0A140T963 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF103-CHMP3A0A140T963 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RNF103-CHMP3A0A140T963 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms