Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 FRMD8P1-201ENST00000440433 1524 ntBASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 PAN3-AS1-201ENST00000563843 1351 ntBASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 SAPCD2P3-201ENST00000455031 850 ntBASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 SKP2-204ENST00000508514 821 ntTSL 3 BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 AL355877.3-201ENST00000622820 899 ntBASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 AC099398.1-201ENST00000567919 2776 ntBASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV1A0A0A0MS02 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 HIST2H3DP1-201ENST00000401004 416 ntBASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 PRYP5-201ENST00000451909 266 ntBASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC12.28□□□□□ -0.44
TRGV1A0A0A0MS02 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms