Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 LINC00167-201ENST00000530583 1419 ntBASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 SLC25A1P3-201ENST00000395415 828 ntBASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 AL592071.1-201ENST00000611956 408 ntBASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 LINC02228-204ENST00000642115 2962 ntBASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP4B1Q9Y6B7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 AC126177.1-201ENST00000547829 2218 ntBASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 HCG4P8-203ENST00000443049 980 ntBASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 VENTXP7-201ENST00000475503 772 ntBASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 MIR3180-1-201ENST00000580374 94 ntBASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 MIR3180-3-201ENST00000584616 94 ntBASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 AC092119.3-201ENST00000612618 583 ntBASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP4B1Q9Y6B7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
AP4B1Q9Y6B7 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
AP4B1Q9Y6B7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
AP4B1Q9Y6B7 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
AP4B1Q9Y6B7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
AP4B1Q9Y6B7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.27■□□□□ 0.19
AP4B1Q9Y6B7 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
AP4B1Q9Y6B7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
AP4B1Q9Y6B7 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
AP4B1Q9Y6B7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
AP4B1Q9Y6B7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP4B1Q9Y6B7 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP4B1Q9Y6B7 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
AP4B1Q9Y6B7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
AP4B1Q9Y6B7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms