Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP15Q9Y4E8 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP15Q9Y4E8 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP15Q9Y4E8 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP15Q9Y4E8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
USP15Q9Y4E8 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP15Q9Y4E8 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP15Q9Y4E8 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP15Q9Y4E8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP15Q9Y4E8 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP15Q9Y4E8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 PMS2P4-201ENST00000412466 1052 ntBASIC18.23■□□□□ 0.51
USP15Q9Y4E8 AC015922.1-201ENST00000421102 1152 ntBASIC18.23■□□□□ 0.51
USP15Q9Y4E8 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 HLA-J-202ENST00000469281 1241 ntBASIC18.23■□□□□ 0.51
USP15Q9Y4E8 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 CXCL1P1-201ENST00000502804 216 ntBASIC18.23■□□□□ 0.51
USP15Q9Y4E8 AC093214.1-201ENST00000511688 1107 ntBASIC18.23■□□□□ 0.51
USP15Q9Y4E8 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 AC093010.1-201ENST00000473625 1624 ntBASIC18.23■□□□□ 0.51
USP15Q9Y4E8 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP15Q9Y4E8 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP15Q9Y4E8 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.22■□□□□ 0.51
USP15Q9Y4E8 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USP15Q9Y4E8 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP15Q9Y4E8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP15Q9Y4E8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USP15Q9Y4E8 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.22■□□□□ 0.51
USP15Q9Y4E8 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP15Q9Y4E8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP15Q9Y4E8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
USP15Q9Y4E8 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP15Q9Y4E8 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.22■□□□□ 0.51
USP15Q9Y4E8 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.22■□□□□ 0.51
USP15Q9Y4E8 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.22■□□□□ 0.51
USP15Q9Y4E8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.22■□□□□ 0.51
USP15Q9Y4E8 DDX43P3-201ENST00000441064 443 ntBASIC18.22■□□□□ 0.51
USP15Q9Y4E8 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.22■□□□□ 0.51
USP15Q9Y4E8 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
USP15Q9Y4E8 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.22■□□□□ 0.51
USP15Q9Y4E8 DUX4L27-201ENST00000554796 1261 ntBASIC18.22■□□□□ 0.51
USP15Q9Y4E8 AC109462.3-201ENST00000573934 613 ntBASIC18.22■□□□□ 0.51
USP15Q9Y4E8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.22■□□□□ 0.51
USP15Q9Y4E8 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP15Q9Y4E8 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
USP15Q9Y4E8 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP15Q9Y4E8 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.22■□□□□ 0.51
USP15Q9Y4E8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
USP15Q9Y4E8 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USP15Q9Y4E8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP15Q9Y4E8 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
USP15Q9Y4E8 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USP15Q9Y4E8 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP15Q9Y4E8 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.22■□□□□ 0.51
USP15Q9Y4E8 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP15Q9Y4E8 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP15Q9Y4E8 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.21■□□□□ 0.51
USP15Q9Y4E8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP15Q9Y4E8 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP15Q9Y4E8 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP15Q9Y4E8 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP15Q9Y4E8 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP15Q9Y4E8 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
USP15Q9Y4E8 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
USP15Q9Y4E8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP15Q9Y4E8 AC092919.2-201ENST00000623631 1645 ntBASIC18.21■□□□□ 0.51
USP15Q9Y4E8 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.21■□□□□ 0.51
USP15Q9Y4E8 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
USP15Q9Y4E8 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP15Q9Y4E8 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
USP15Q9Y4E8 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP15Q9Y4E8 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms