Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 AD001527.2-201ENST00000622994 785 ntBASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 AC024909.3-201ENST00000611513 2257 ntBASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 TERF1P1-201ENST00000311003 1181 ntBASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 AL845331.1-201ENST00000424978 1190 ntBASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 LY6E-213ENST00000522528 606 ntTSL 3 BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2D4Q9Y2X8 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms