Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NCKAP1Q9Y2A7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NCKAP1Q9Y2A7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 PMS2P4-201ENST00000412466 1052 ntBASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 AC069335.1-201ENST00000489972 472 ntBASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 AC093520.2-201ENST00000561830 333 ntBASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 AL031055.1-201ENST00000606362 631 ntBASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 AC134043.2-201ENST00000624206 2238 ntBASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.89■□□□□ 0.29
NCKAP1Q9Y2A7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 AC068880.1-201ENST00000507289 2297 ntBASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 UXT-AS1-201ENST00000590504 1525 ntBASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 KRT8P23-201ENST00000560090 1207 ntBASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 MIR3197-201ENST00000582241 73 ntBASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 LINC02084-201ENST00000606069 1096 ntBASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCKAP1Q9Y2A7 WASH6P-202ENST00000359512 1437 ntBASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 AC131009.4-201ENST00000624048 1740 ntBASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 CNN2P2-201ENST00000443536 909 ntBASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.87■□□□□ 0.29
NCKAP1Q9Y2A7 CNN2P3-201ENST00000450201 906 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms